type: position_score
table:
  filename: ENCFF562ZOV.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: TF_ChIP-seq_ENCSR000EEZ
  column_index: 3
  type: float
  desc: 'TF_ChIP-seq ENCSR000EEZ [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="MAX"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'TF_ChIP-seq ENCSR000EEZ [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="MAX"]'
  description: '**status**: released


    **biological\_replicates**: Rep 1, Rep 2


    **summary**: newborn


    **output\_type**: IDR thresholded peaks


    **audit\_internal\_action**: Released analysis {ENCAN114NRZ|/analyses/ENCAN114NRZ/}
    has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/}


    **audit\_internal\_action**: Released analysis {ENCAN114NRZ|/analyses/ENCAN114NRZ/}
    has in progress subobject document {6f779aba-4605-4410-a819-0c80d0e646c2|/documents/6f779aba-4605-4410-a819-0c80d0e646c2/}


    **audit\_not\_compliant**: Processed alignments file {ENCFF801OVR|/files/ENCFF801OVR/}
    processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 9335346 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    MAX-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )


    **audit\_not\_compliant**: Processed alignments file {ENCFF302DYJ|/files/ENCFF302DYJ/}
    processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 6983721 usable fragments.
    The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    MAX-human and investigated as a transcription factor is 10 million usable fragments.
    The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/} )'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR000EEZ
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: newborn
    biosample_summary: Homo sapiens endothelial cell of umbilical vein newborn
    replication_type: isogenic
    biosample_ontology: /biosample-types/primary_cell_CL_0002618/
    perturbed: false
    doi: 10.17989/ENCSR000EEZ
    date_created: '2014-02-12T22:57:54.893654+00:00'
    date_released: '2011-10-29'
    submitter_comment: As of August 2022, the donors associated with the biosamples
      in this dataset were changed from ENCDO000AAS to ENCDO466MPW and ENCDO560UMK.
      See PMID:32728101.
    target: MAX