Resource

Id TF_ChIP-seq/ENCSR000BTHcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BTH [biosample_summary="Homo sapiens SK-N-SH" and target="GATA3"]
Description
Labels
  • accession: ENCSR000BTH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003072/
  • biosample_summary: Homo sapiens SK-N-SH
  • date_created: 2013-09-13T16:02:13.513897-08:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BTH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: GATA3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BTH float

TF_ChIP-seq_ENCSR000BTH
TF_ChIP-seq ENCSR000BTH [biosample_summary="Homo sapiens SK-N-SH" and target="GATA3"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BTH [6.81, 627]
n
22,326,416
mean
101
sd
101

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 223264160.69% 74672
chr1 2126747 0.85% 7129
chr2 2113937 0.87% 7107
chr3 1686915 0.85% 5645
chr4 1384922 0.73% 4654
chr5 1568781 0.86% 5207
chr6 1357571 0.79% 4544
chr7 1477143 0.93% 4863
chr8 1109142 0.76% 3677
chr9 932071 0.67% 3144
chr10 1150618 0.86% 3846
chr11 1046542 0.77% 3536
chr12 1142152 0.86% 3819
chr13 767691 0.67% 2546
chr14 597279 0.56% 1991
chr15 692712 0.68% 2343
chr16 409801 0.45% 1401
chr17 708512 0.85% 2362
chr18 541858 0.67% 1813
chr19 194742 0.33% 650
chr20 399581 0.62% 1329
chr21 224676 0.48% 747
chr22 196300 0.39% 658
chrX 496723 0.32% 1661
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74672 1 1161 298.99 364
global segment-length histogram

Files

Filename Size md5
ENCFF833ZAC.bed.gz 1.17 MB a572d0981283a3116f64dcabe1746018
ENCFF833ZAC.tabix.bed.gz 870.66 KB 936de35fc0f3dd6c320bb38de74c6199
ENCFF833ZAC.tabix.bed.gz.tbi 325.92 KB 638e3f74a0150796d3f0849016b41c7d
genomic_resource.yaml 1.56 KB f9a21d326357178716cfb11503f4520f
statistics/