Resource

Id TF_ChIP-seq/ENCSR000BTAcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BTA [biosample_summary="Homo sapiens SK-N-SH" and target="ELF1"]
Description
Labels
  • accession: ENCSR000BTA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003072/
  • biosample_summary: Homo sapiens SK-N-SH
  • date_created: 2013-09-13T16:01:09.824174-08:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BTA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: ELF1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BTA float

TF_ChIP-seq_ENCSR000BTA
TF_ChIP-seq ENCSR000BTA [biosample_summary="Homo sapiens SK-N-SH" and target="ELF1"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BTA [5.42, 506]
n
3,954,302
mean
49.3
sd
53

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 39543020.12% 13794
chr1 386698 0.16% 1358
chr2 297583 0.12% 1033
chr3 239874 0.12% 832
chr4 160142 0.08% 549
chr5 202078 0.11% 697
chr6 217481 0.13% 747
chr7 270180 0.17% 933
chr8 163900 0.11% 562
chr9 153765 0.11% 534
chr10 170272 0.13% 577
chr11 209727 0.16% 756
chr12 194779 0.15% 678
chr13 85633 0.07% 301
chr14 110415 0.10% 383
chr15 126197 0.12% 442
chr16 150493 0.17% 544
chr17 215435 0.26% 744
chr18 59640 0.07% 203
chr19 232863 0.40% 859
chr20 108914 0.17% 385
chr21 39723 0.09% 137
chr22 63265 0.12% 213
chrX 95245 0.06% 327
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 13794 3 632 286.67 344
global segment-length histogram

Files

Filename Size md5
ENCFF290IBP.bed.gz 218.66 KB 8753774081b1c8dd6b3ca892d529109e
ENCFF290IBP.tabix.bed.gz 161.38 KB db899c42404d6c32052a3fd1c8169a9a
ENCFF290IBP.tabix.bed.gz.tbi 97.5 KB d0e42b7ee290b6d0399c0410ad9a168a
genomic_resource.yaml 1.56 KB 5f02ddd19e348e57aef705e6c4496072
statistics/