Resource

Id TF_ChIP-seq/ENCSR000BSZcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSZ [biosample_summary="Homo sapiens Ishikawa" and target="ZBTB7A"]
Description
Labels
  • accession: ENCSR000BSZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005718/
  • biosample_summary: Homo sapiens Ishikawa
  • date_created: 2013-11-06T05:08:03.018172+00:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: ZBTB7A

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSZ float

TF_ChIP-seq_ENCSR000BSZ
TF_ChIP-seq ENCSR000BSZ [biosample_summary="Homo sapiens Ishikawa" and target="ZBTB7A"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSZ [6.91, 297]
n
10,268,806
mean
33.2
sd
18.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 102688060.32% 27450
chr1 1008490 0.41% 2669
chr2 645182 0.27% 1659
chr3 516417 0.26% 1376
chr4 323930 0.17% 844
chr5 398099 0.22% 1050
chr6 448157 0.26% 1207
chr7 446757 0.28% 1173
chr8 353819 0.24% 980
chr9 473658 0.34% 1263
chr10 532199 0.40% 1453
chr11 602917 0.45% 1632
chr12 600647 0.45% 1638
chr13 145545 0.13% 390
chr14 330153 0.31% 900
chr15 285726 0.28% 738
chr16 518043 0.57% 1398
chr17 769644 0.92% 2054
chr18 155844 0.19% 424
chr19 859836 1.47% 2296
chr20 307007 0.48% 812
chr21 105077 0.22% 283
chr22 349651 0.69% 963
chrX 92008 0.06% 248
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27450 1 1034 374.09 347
global segment-length histogram

Files

Filename Size md5
ENCFF479IHN.bed.gz 398.98 KB 1904b471806080d726ad98bd36ae8467
ENCFF479IHN.tabix.bed.gz 310.98 KB 96ef5eb3859d1061ae5a5d73f8f9c139
ENCFF479IHN.tabix.bed.gz.tbi 107.61 KB 80ef6fbb4b56b9c6ea992677b3c4f7c2
genomic_resource.yaml 2.07 KB fba0ad4a4d3e865e437f77bb8156794a
statistics/