Resource

Id TF_ChIP-seq/ENCSR000BSYcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSY [biosample_summary="Homo sapiens Ishikawa" and target="YY1"]
Description
Labels
  • accession: ENCSR000BSY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005718/
  • biosample_summary: Homo sapiens Ishikawa
  • date_created: 2013-11-06T05:08:01.031028+00:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: YY1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSY float

TF_ChIP-seq_ENCSR000BSY
TF_ChIP-seq ENCSR000BSY [biosample_summary="Homo sapiens Ishikawa" and target="YY1"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSY [5.38, 495]
n
5,710,023
mean
59.5
sd
75

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 57100230.18% 19919
chr1 563970 0.23% 1969
chr2 382723 0.16% 1306
chr3 354089 0.18% 1221
chr4 221969 0.12% 770
chr5 250743 0.14% 873
chr6 314793 0.18% 1104
chr7 259979 0.16% 912
chr8 200122 0.14% 684
chr9 234743 0.17% 812
chr10 315051 0.24% 1109
chr11 301524 0.22% 1064
chr12 381268 0.29% 1326
chr13 114432 0.10% 404
chr14 180307 0.17% 624
chr15 165783 0.16% 573
chr16 235994 0.26% 830
chr17 334891 0.40% 1195
chr18 100284 0.12% 347
chr19 348604 0.59% 1198
chr20 154327 0.24% 537
chr21 54958 0.12% 204
chr22 153896 0.30% 545
chrX 85573 0.05% 312
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19919 1 1155 286.66 340
global segment-length histogram

Files

Filename Size md5
ENCFF545PFH.bed.gz 314.27 KB 83a1c0051f4a5a14d321d9ef32569dee
ENCFF545PFH.tabix.bed.gz 231.7 KB 79838b71e39cc25983d8f3dd0ef41c97
ENCFF545PFH.tabix.bed.gz.tbi 123.46 KB ec94c8d5a3e671ee08f9dfe0eac10685
genomic_resource.yaml 2.06 KB 7548e4da0b12265dd7cc459aeb83e20c
statistics/