Resource

Id TF_ChIP-seq/ENCSR000BSKcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSK [biosample_summary="Homo sapiens SK-N-SH" and target="JUND"]
Description
Labels
  • accession: ENCSR000BSK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003072/
  • biosample_summary: Homo sapiens SK-N-SH
  • date_created: 2013-09-13T16:54:31.811292-08:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: JUND

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSK float

TF_ChIP-seq_ENCSR000BSK
TF_ChIP-seq ENCSR000BSK [biosample_summary="Homo sapiens SK-N-SH" and target="JUND"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSK [6.93, 404]
n
11,799,241
mean
56.1
sd
42.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 117992410.37% 42328
chr1 1161107 0.47% 4175
chr2 1066492 0.44% 3825
chr3 874510 0.44% 3116
chr4 678933 0.36% 2423
chr5 785471 0.43% 2829
chr6 712838 0.42% 2565
chr7 774552 0.49% 2801
chr8 564001 0.39% 2057
chr9 493145 0.36% 1764
chr10 601297 0.45% 2167
chr11 578652 0.43% 2086
chr12 613994 0.46% 2198
chr13 375456 0.33% 1329
chr14 313648 0.29% 1111
chr15 379478 0.37% 1347
chr16 243876 0.27% 865
chr17 410822 0.49% 1477
chr18 268667 0.33% 972
chr19 144732 0.25% 533
chr20 237199 0.37% 845
chr21 121160 0.26% 443
chr22 132685 0.26% 481
chrX 266526 0.17% 919
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42328 1 799 278.76 320
global segment-length histogram

Files

Filename Size md5
ENCFF217QFC.bed.gz 693.64 KB 5c96a4e6eaa263502efe5c819164f41c
ENCFF217QFC.tabix.bed.gz 491.82 KB e56aa1da453f5ac6d23e9854143fb4bd
ENCFF217QFC.tabix.bed.gz.tbi 226.52 KB e9e40f27d9c73a086cf3e5f1ca363bb0
genomic_resource.yaml 1.56 KB d4f1c51baa3fb091e7265735d0a4a1d0
statistics/