Resource

Id TF_ChIP-seq/ENCSR000BSJcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BSJ [biosample_summary="Homo sapiens H1" and target="MAX"]
Description
Labels
  • accession: ENCSR000BSJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-12-12T06:34:02.584348+00:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BSJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: MAX

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BSJ float

TF_ChIP-seq_ENCSR000BSJ
TF_ChIP-seq ENCSR000BSJ [biosample_summary="Homo sapiens H1" and target="MAX"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BSJ [6.39, 564]
n
12,503,738
mean
58.2
sd
53.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 125037380.39% 44690
chr1 1206935 0.48% 4330
chr2 875847 0.36% 3178
chr3 697799 0.35% 2504
chr4 501442 0.26% 1801
chr5 625266 0.34% 2251
chr6 711861 0.42% 2523
chr7 613999 0.39% 2192
chr8 517328 0.36% 1838
chr9 518143 0.37% 1847
chr10 585271 0.44% 2082
chr11 698108 0.52% 2494
chr12 610884 0.46% 2195
chr13 289737 0.25% 1017
chr14 391991 0.37% 1411
chr15 428519 0.42% 1529
chr16 514698 0.57% 1878
chr17 713298 0.86% 2534
chr18 230155 0.29% 789
chr19 726921 1.24% 2596
chr20 367963 0.57% 1317
chr21 135501 0.29% 476
chr22 306981 0.60% 1090
chrX 232115 0.15% 808
chrY 2976 0.01% 10
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44690 1 955 279.79 356
global segment-length histogram

Files

Filename Size md5
ENCFF460LNS.bed.gz 688.77 KB 49b2fae44d4bb1ea24fc438529071065
ENCFF460LNS.tabix.bed.gz 516.25 KB 57c3fbfeb3bd04dc9eff8bb7e77aade1
ENCFF460LNS.tabix.bed.gz.tbi 225.3 KB 7f1dac638e35ff6834b7e79af6ac3039
genomic_resource.yaml 1.54 KB 6673e2a74c7ed3630fa4d6eec1e38370
statistics/