Resource
| Id | TF_ChIP-seq/ENCSR000BRX |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000BRX [biosample_summary="Homo sapiens GM12878" and target="CEBPB"] |
| Description |
status: archived biological_replicates: summary: output_type: optimal IDR thresholded peaks audit_internal_action: derived_from is a list of files that were used to create a given file; for example, fastq file(s) will appear in the derived_from list of an alignments file. Processed file {ENCFF002CGU|/files/ENCFF002CGU/} is missing the requisite file specification in its derived_from list. |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BRX | float |
TF_ChIP-seq_ENCSR000BRX |
TF_ChIP-seq ENCSR000BRX [biosample_summary="Homo sapiens GM12878" and target="CEBPB"]
|
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[31.2, 183] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 2826832 | 0.09% | 5954 |
| chr1 | 277266 | 0.11% | 584 |
| chr2 | 228195 | 0.09% | 486 |
| chr3 | 208853 | 0.11% | 428 |
| chr4 | 124692 | 0.07% | 256 |
| chr5 | 165342 | 0.09% | 346 |
| chr6 | 222113 | 0.13% | 466 |
| chr7 | 136618 | 0.09% | 285 |
| chr8 | 143301 | 0.10% | 301 |
| chr9 | 100101 | 0.07% | 219 |
| chr10 | 128211 | 0.10% | 272 |
| chr11 | 136673 | 0.10% | 283 |
| chr12 | 163643 | 0.12% | 348 |
| chr13 | 63658 | 0.06% | 138 |
| chr14 | 99273 | 0.09% | 217 |
| chr15 | 89310 | 0.09% | 188 |
| chr16 | 98917 | 0.11% | 206 |
| chr17 | 124862 | 0.15% | 266 |
| chr18 | 49898 | 0.06% | 107 |
| chr19 | 83747 | 0.14% | 177 |
| chr20 | 64232 | 0.10% | 132 |
| chr21 | 36456 | 0.08% | 80 |
| chr22 | 38592 | 0.08% | 84 |
| chrX | 42879 | 0.03% | 85 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 5954 | 5 | 537 | 474.78 | 516 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF002CGU.bed.gz | 128.32 KB | 717cd4e7bb5b9ca65081a1435a3b0cd0 |
| ENCFF002CGU.tabix.bed.gz | 92.32 KB | e691b3172547054bc32e67b97a67e305 |
| ENCFF002CGU.tabix.bed.gz.tbi | 52.48 KB | 1ded6c08c137a44516d5e6ba45b80b4d |
| genomic_resource.yaml | 1.48 KB | c19f6cda4eb36e64986825ea7a67ca20 |
| statistics/ |
