Resource

Id TF_ChIP-seq/ENCSR000BRXcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BRX [biosample_summary="Homo sapiens GM12878" and target="CEBPB"]
Description
Labels
  • accession: ENCSR000BRX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002784/
  • biosample_summary: Homo sapiens GM12878
  • date_created: 2013-09-13T16:53:58.552880-08:00
  • date_released: 2012-09-10
  • doi: 10.17989/ENCSR000BRX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: CEBPB

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BRX float

TF_ChIP-seq_ENCSR000BRX

TF_ChIP-seq ENCSR000BRX [biosample_summary="Homo sapiens GM12878" and target="CEBPB"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000BRX [31.2, 183]
n
2,826,832
mean
42.6
sd
12.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 28268320.09% 5954
chr1 277266 0.11% 584
chr2 228195 0.09% 486
chr3 208853 0.11% 428
chr4 124692 0.07% 256
chr5 165342 0.09% 346
chr6 222113 0.13% 466
chr7 136618 0.09% 285
chr8 143301 0.10% 301
chr9 100101 0.07% 219
chr10 128211 0.10% 272
chr11 136673 0.10% 283
chr12 163643 0.12% 348
chr13 63658 0.06% 138
chr14 99273 0.09% 217
chr15 89310 0.09% 188
chr16 98917 0.11% 206
chr17 124862 0.15% 266
chr18 49898 0.06% 107
chr19 83747 0.14% 177
chr20 64232 0.10% 132
chr21 36456 0.08% 80
chr22 38592 0.08% 84
chrX 42879 0.03% 85
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 5954 5 537 474.78 516
global segment-length histogram

Files

Filename Size md5
ENCFF002CGU.bed.gz 128.32 KB 717cd4e7bb5b9ca65081a1435a3b0cd0
ENCFF002CGU.tabix.bed.gz 92.32 KB e691b3172547054bc32e67b97a67e305
ENCFF002CGU.tabix.bed.gz.tbi 52.48 KB 1ded6c08c137a44516d5e6ba45b80b4d
genomic_resource.yaml 1.48 KB c19f6cda4eb36e64986825ea7a67ca20
statistics/