Resource

Id TF_ChIP-seq/ENCSR000BRRcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BRR [biosample_summary="Homo sapiens K562" and target="STAT5A"]
Description
Labels
  • accession: ENCSR000BRR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-09-13T16:01:27.861581-08:00
  • date_released: 2012-02-29
  • doi: 10.17989/ENCSR000BRR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: STAT5A

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BRR float

TF_ChIP-seq_ENCSR000BRR

TF_ChIP-seq ENCSR000BRR [biosample_summary="Homo sapiens K562" and target="STAT5A"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000BRR [7.08, 599]
n
3,904,856
mean
64.2
sd
66.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 39048560.12% 13786
chr1 516332 0.21% 1832
chr2 288354 0.12% 1028
chr3 244565 0.12% 852
chr4 171443 0.09% 596
chr5 197410 0.11% 694
chr6 364569 0.21% 1275
chr7 260659 0.16% 917
chr8 163747 0.11% 568
chr9 120135 0.09% 440
chr10 161765 0.12% 577
chr11 188888 0.14% 677
chr12 188228 0.14% 645
chr13 68920 0.06% 244
chr14 70523 0.07% 239
chr15 110798 0.11% 392
chr16 111774 0.12% 401
chr17 165559 0.20% 572
chr18 62875 0.08% 220
chr19 129092 0.22% 458
chr20 87236 0.14% 306
chr21 48237 0.10% 176
chr22 84786 0.17% 313
chrX 98961 0.06% 364
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 13786 9 747 283.25 340
global segment-length histogram

Files

Filename Size md5
ENCFF187BVL.bed.gz 220.4 KB abe228df0cb99f1aa79de79b2a7ad86e
ENCFF187BVL.tabix.bed.gz 162.73 KB effc2cef7335c168a892efe33142e985
ENCFF187BVL.tabix.bed.gz.tbi 97.46 KB e38b44e01dea9f7ef10e321bbd299128
genomic_resource.yaml 2.1 KB fe9cced521952e794992b783fe618200
statistics/