Resource
| Id | TF_ChIP-seq/ENCSR000BRP |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000BRP [biosample_summary="Homo sapiens HepG2" and target="TEAD4"] |
| Description |
status: archived biological_replicates: summary: output_type: optimal IDR thresholded peaks audit_internal_action: derived_from is a list of files that were used to create a given file; for example, fastq file(s) will appear in the derived_from list of an alignments file. Processed file {ENCFF002CLG|/files/ENCFF002CLG/} is missing the requisite file specification in its derived_from list. |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BRP | float |
TF_ChIP-seq_ENCSR000BRP |
TF_ChIP-seq ENCSR000BRP [biosample_summary="Homo sapiens HepG2" and target="TEAD4"]
|
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[25.6, 360] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 5772537 | 0.18% | 15493 |
| chr1 | 483087 | 0.19% | 1291 |
| chr2 | 746211 | 0.31% | 2010 |
| chr3 | 376874 | 0.19% | 1014 |
| chr4 | 229665 | 0.12% | 613 |
| chr5 | 257696 | 0.14% | 693 |
| chr6 | 508965 | 0.30% | 1375 |
| chr7 | 281779 | 0.18% | 770 |
| chr8 | 213905 | 0.15% | 582 |
| chr9 | 216652 | 0.16% | 569 |
| chr10 | 250664 | 0.19% | 671 |
| chr11 | 234594 | 0.17% | 627 |
| chr12 | 252770 | 0.19% | 682 |
| chr13 | 81484 | 0.07% | 210 |
| chr14 | 214770 | 0.20% | 589 |
| chr15 | 128217 | 0.13% | 340 |
| chr16 | 259881 | 0.29% | 684 |
| chr17 | 323015 | 0.39% | 871 |
| chr18 | 107449 | 0.13% | 289 |
| chr19 | 154435 | 0.26% | 399 |
| chr20 | 231754 | 0.36% | 626 |
| chr21 | 46501 | 0.10% | 127 |
| chr22 | 89252 | 0.18% | 241 |
| chrX | 80589 | 0.05% | 214 |
| chrY | 2328 | <0.01% | 6 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 15493 | 1 | 823 | 372.59 | 440 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF002CLG.bed.gz | 291.74 KB | 4fedf810164ae7df7dd049dca4a257aa |
| ENCFF002CLG.tabix.bed.gz | 237.5 KB | 280fd8700d2e52757f9d22117d044d53 |
| ENCFF002CLG.tabix.bed.gz.tbi | 109.4 KB | f989eddce8b4162f3385a5737c527f60 |
| genomic_resource.yaml | 1.47 KB | 3880466161aaf831794163f4b673f147 |
| statistics/ |
