Resource

Id TF_ChIP-seq/ENCSR000BQYcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BQY [biosample_summary="Homo sapiens K562" and target="PML"]
Description
Labels
  • accession: ENCSR000BQY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-09-13T16:02:31.184093-08:00
  • date_released: 2012-02-29
  • doi: 10.17989/ENCSR000BQY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: PML

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BQY float

TF_ChIP-seq_ENCSR000BQY

TF_ChIP-seq ENCSR000BQY [biosample_summary="Homo sapiens K562" and target="PML"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000BQY [6.78, 792]
n
8,702,930
mean
49.6
sd
49.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 87029300.27% 24967
chr1 1084240 0.44% 3192
chr1_KI270713v1_random 1135 2.79% 4
chr2 638689 0.26% 1842
chr3 518120 0.26% 1458
chr4 337845 0.18% 967
chr5 440870 0.24% 1278
chr6 721975 0.42% 2128
chr7 554177 0.35% 1632
chr8 330967 0.23% 932
chr9 288443 0.21% 791
chr10 333837 0.25% 937
chr11 471434 0.35% 1348
chr12 448382 0.34% 1266
chr13 92793 0.08% 257
chr14 176825 0.17% 487
chr15 245470 0.24% 695
chr16 337851 0.37% 991
chr17 431281 0.52% 1224
chr18 119337 0.15% 330
chr19 474548 0.81% 1389
chr20 192032 0.30% 543
chr21 84558 0.18% 260
chr22 160675 0.32% 450
chrM 9837 59.37% 37
chrX 207609 0.13% 529
3341 contigs with no values (186247186 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24967 1 5257 348.58 317
global segment-length histogram

Files

Filename Size md5
ENCFF800QDU.bed.gz 357.18 KB 6eec23a48cdde52ad1922299a27a72ad
ENCFF800QDU.tabix.bed.gz 286.58 KB c4cecd91dda6419ff94483e51b9dfa40
ENCFF800QDU.tabix.bed.gz.tbi 120.61 KB 6dc50d11272578305e9f42c3fe4665cd
genomic_resource.yaml 2.01 KB 5755f0daff5fdb1d39d204de6d17d0e7
statistics/