Resource
| Id | TF_ChIP-seq/ENCSR000BQW |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000BQW [biosample_summary="Homo sapiens HepG2" and target="MBD4"] |
| Description |
status: archived biological_replicates: summary: output_type: optimal IDR thresholded peaks audit_internal_action: derived_from is a list of files that were used to create a given file; for example, fastq file(s) will appear in the derived_from list of an alignments file. Processed file {ENCFF002CKQ|/files/ENCFF002CKQ/} is missing the requisite file specification in its derived_from list. |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BQW | float |
TF_ChIP-seq_ENCSR000BQW |
TF_ChIP-seq ENCSR000BQW [biosample_summary="Homo sapiens HepG2" and target="MBD4"]
|
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[35.6, 229] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 3076986 | 0.10% | 6249 |
| chr1 | 209083 | 0.08% | 414 |
| chr2 | 510124 | 0.21% | 1099 |
| chr3 | 174798 | 0.09% | 345 |
| chr4 | 127503 | 0.07% | 252 |
| chr5 | 101348 | 0.06% | 198 |
| chr6 | 333458 | 0.20% | 699 |
| chr7 | 117701 | 0.07% | 232 |
| chr8 | 104465 | 0.07% | 209 |
| chr9 | 95058 | 0.07% | 190 |
| chr10 | 119725 | 0.09% | 246 |
| chr11 | 103997 | 0.08% | 205 |
| chr12 | 123974 | 0.09% | 254 |
| chr13 | 37746 | 0.03% | 69 |
| chr14 | 144178 | 0.13% | 300 |
| chr15 | 48287 | 0.05% | 94 |
| chr16 | 148550 | 0.16% | 289 |
| chr17 | 212612 | 0.26% | 425 |
| chr18 | 34911 | 0.04% | 65 |
| chr19 | 57407 | 0.10% | 116 |
| chr20 | 199323 | 0.31% | 406 |
| chr21 | 22243 | 0.05% | 43 |
| chr22 | 31207 | 0.06% | 60 |
| chrX | 19288 | 0.01% | 39 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 6249 | 2 | 1905 | 492.4 | 564 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF002CKQ.bed.gz | 142.39 KB | ac8457119d81e49f3cb820183b3253e3 |
| ENCFF002CKQ.tabix.bed.gz | 96.66 KB | 1d9fcb9819e70054ee2aedb4c58cf228 |
| ENCFF002CKQ.tabix.bed.gz.tbi | 50.62 KB | 5ac8db7b52bc7a6b0b03109aab05596f |
| genomic_resource.yaml | 1.47 KB | b07ee06f35bd2db20141d88c993e9c2a |
| statistics/ |
