Resource
| Id | TF_ChIP-seq/ENCSR000BQU |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000BQU [biosample_summary="Homo sapiens H1" and target="ATF2"] |
| Description |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: IDR thresholded peaks audit_internal_action: Released analysis {ENCAN927WAK|/analyses/ENCAN927WAK/} has in progress subobject document {ad9771f6-6762-42a9-bfce-dc7dda0e603b|/documents/ad9771f6-6762-42a9-bfce-dc7dda0e603b/} audit_internal_action: Released analysis {ENCAN927WAK|/analyses/ENCAN927WAK/} has in progress subobject quality standard {encode4-tf-chip|/quality-standards/encode4-tf-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BQU | float |
TF_ChIP-seq_ENCSR000BQU |
TF_ChIP-seq ENCSR000BQU [biosample_summary="Homo sapiens H1" and target="ATF2"]
|
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[8.78, 456] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 4198356 | 0.13% | 10044 |
| chr1 | 456318 | 0.18% | 1134 |
| chr2 | 287128 | 0.12% | 688 |
| chr3 | 269428 | 0.14% | 649 |
| chr4 | 187876 | 0.10% | 453 |
| chr5 | 248611 | 0.14% | 578 |
| chr6 | 325955 | 0.19% | 782 |
| chr7 | 232381 | 0.15% | 523 |
| chr8 | 161469 | 0.11% | 377 |
| chr9 | 162992 | 0.12% | 383 |
| chr10 | 163790 | 0.12% | 369 |
| chr11 | 245400 | 0.18% | 606 |
| chr12 | 234872 | 0.18% | 556 |
| chr13 | 79205 | 0.07% | 178 |
| chr14 | 125646 | 0.12% | 310 |
| chr15 | 119718 | 0.12% | 285 |
| chr16 | 146772 | 0.16% | 346 |
| chr17 | 216688 | 0.26% | 542 |
| chr18 | 65657 | 0.08% | 145 |
| chr19 | 221255 | 0.38% | 550 |
| chr20 | 89986 | 0.14% | 219 |
| chr21 | 22238 | 0.05% | 50 |
| chr22 | 80099 | 0.16% | 191 |
| chrX | 54872 | 0.04% | 130 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 10044 | 1 | 3115 | 418 | 570 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF352KLD.bed.gz | 148.77 KB | f2d8da4f96ee322d13e45f9719c226d2 |
| ENCFF352KLD.tabix.bed.gz | 117.35 KB | 0d3d7c8eb73b87de27f40ef5b7aab4cf |
| ENCFF352KLD.tabix.bed.gz.tbi | 65.33 KB | ed849127f56ff8097dcd161556a327a5 |
| genomic_resource.yaml | 1.54 KB | 035f5ae7af562c50678a538aa55e0bc0 |
| statistics/ |
