Resource
| Id | TF_ChIP-seq/ENCSR000BQT |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000BQT [biosample_summary="Homo sapiens GM12878" and target="TCF3"] |
| Description |
status: archived biological_replicates: summary: output_type: optimal IDR thresholded peaks audit_internal_action: derived_from is a list of files that were used to create a given file; for example, fastq file(s) will appear in the derived_from list of an alignments file. Processed file {ENCFF002CIA|/files/ENCFF002CIA/} is missing the requisite file specification in its derived_from list. |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BQT | float |
TF_ChIP-seq_ENCSR000BQT |
TF_ChIP-seq ENCSR000BQT [biosample_summary="Homo sapiens GM12878" and target="TCF3"]
|
![]() |
[18.5, 397] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 4457230 | 0.14% | 16101 |
| chr1 | 412387 | 0.17% | 1484 |
| chr2 | 331808 | 0.14% | 1194 |
| chr3 | 246303 | 0.12% | 900 |
| chr4 | 165629 | 0.09% | 598 |
| chr5 | 213453 | 0.12% | 784 |
| chr6 | 285074 | 0.17% | 1013 |
| chr7 | 213574 | 0.13% | 771 |
| chr8 | 172569 | 0.12% | 628 |
| chr9 | 180456 | 0.13% | 651 |
| chr10 | 196492 | 0.15% | 716 |
| chr11 | 223870 | 0.17% | 812 |
| chr12 | 218308 | 0.16% | 792 |
| chr13 | 94872 | 0.08% | 342 |
| chr14 | 149418 | 0.14% | 547 |
| chr15 | 141273 | 0.14% | 507 |
| chr16 | 225646 | 0.25% | 800 |
| chr17 | 269107 | 0.32% | 975 |
| chr18 | 78993 | 0.10% | 285 |
| chr19 | 250160 | 0.43% | 904 |
| chr20 | 133487 | 0.21% | 481 |
| chr21 | 69823 | 0.15% | 247 |
| chr22 | 113112 | 0.22% | 409 |
| chrX | 71416 | 0.05% | 261 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 16101 | 3 | 1104 | 276.83 | 304 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF002CIA.bed.gz | 302.9 KB | 9baa9ee4a9b96d7251adcafd95b2c5be |
| ENCFF002CIA.tabix.bed.gz | 244.89 KB | 6aece8476c3e7e5f89833d353f197ebe |
| ENCFF002CIA.tabix.bed.gz.tbi | 112.45 KB | f7e0a1ffc9a607c55ab2209ab572b3e3 |
| genomic_resource.yaml | 1.48 KB | 4d94ccfec70bbc2563841301f56f2570 |
| statistics/ |
