Resource

Id TF_ChIP-seq/ENCSR000BOUcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BOU [biosample_summary="Homo sapiens HepG2" and target="SP2"]
Description
Labels
  • accession: ENCSR000BOU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001187/
  • biosample_summary: Homo sapiens HepG2
  • date_created: 2013-09-13T15:57:53.720046-08:00
  • date_released: 2012-02-29
  • doi: 10.17989/ENCSR000BOU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: SP2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BOU float

TF_ChIP-seq_ENCSR000BOU
TF_ChIP-seq ENCSR000BOU [biosample_summary="Homo sapiens HepG2" and target="SP2"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BOU [14.1, 220]
n
581,639
mean
36.4
sd
27.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 5816390.02% 2628
chr1 55687 0.02% 256
chr2 43434 0.02% 195
chr3 33164 0.02% 152
chr4 15394 0.01% 70
chr5 31974 0.02% 150
chr6 30700 0.02% 140
chr7 33061 0.02% 150
chr8 18049 0.01% 81
chr9 23352 0.02% 106
chr10 21291 0.02% 94
chr11 31903 0.02% 143
chr12 25768 0.02% 116
chr13 8526 0.01% 40
chr14 16345 0.02% 73
chr15 16703 0.02% 78
chr16 29877 0.03% 133
chr17 44003 0.05% 193
chr18 8749 0.01% 40
chr19 50527 0.09% 225
chr20 21473 0.03% 98
chr21 1773 <0.01% 8
chr22 12855 0.03% 56
chrX 7031 <0.01% 31
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2628 38 386 221.32 244
global segment-length histogram

Files

Filename Size md5
ENCFF002CLC.bed.gz 52.95 KB e1471c7cbf9595e265e9922d08396e44
ENCFF002CLC.tabix.bed.gz 41.05 KB 3985a154f2740f622df8bd5071fd1f92
ENCFF002CLC.tabix.bed.gz.tbi 30.63 KB 60ee8366d1680e383ec2b50fc0065216
genomic_resource.yaml 1.47 KB 6e5b806341f418cd75e25d37c48eb490
statistics/