Resource
| Id | TF_ChIP-seq/ENCSR000BMU |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000BMU [biosample_summary="Homo sapiens H1" and target="POU5F1"] |
| Description |
status: archived biological_replicates: summary: output_type: optimal IDR thresholded peaks audit_internal_action: derived_from is a list of files that were used to create a given file; for example, fastq file(s) will appear in the derived_from list of an alignments file. Processed file {ENCFF002CJF|/files/ENCFF002CJF/} is missing the requisite file specification in its derived_from list. |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000BMU | float |
TF_ChIP-seq_ENCSR000BMU |
TF_ChIP-seq ENCSR000BMU [biosample_summary="Homo sapiens H1" and target="POU5F1"]
|
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[15.8, 233] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 855651 | 0.03% | 3997 |
| chr1 | 76968 | 0.03% | 360 |
| chr2 | 70644 | 0.03% | 328 |
| chr3 | 59462 | 0.03% | 279 |
| chr4 | 52505 | 0.03% | 246 |
| chr5 | 52925 | 0.03% | 246 |
| chr6 | 64915 | 0.04% | 303 |
| chr7 | 51166 | 0.03% | 240 |
| chr8 | 43384 | 0.03% | 203 |
| chr9 | 34372 | 0.02% | 160 |
| chr10 | 41462 | 0.03% | 195 |
| chr11 | 37350 | 0.03% | 174 |
| chr12 | 44943 | 0.03% | 209 |
| chr13 | 32572 | 0.03% | 152 |
| chr14 | 26553 | 0.02% | 124 |
| chr15 | 24951 | 0.02% | 116 |
| chr16 | 25002 | 0.03% | 118 |
| chr17 | 26725 | 0.03% | 125 |
| chr18 | 20321 | 0.03% | 96 |
| chr19 | 15120 | 0.03% | 70 |
| chr20 | 18152 | 0.03% | 85 |
| chr21 | 7128 | 0.02% | 33 |
| chr22 | 8424 | 0.02% | 39 |
| chrX | 19959 | 0.01% | 93 |
| chrY | 648 | <0.01% | 3 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 3997 | 54 | 236 | 214.07 | 216 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF002CJF.bed.gz | 80.3 KB | 2c019ef9ca5383733d5a63fa2ea9a677 |
| ENCFF002CJF.tabix.bed.gz | 61.82 KB | e83db8a93945944a04cae7fd8ac59918 |
| ENCFF002CJF.tabix.bed.gz.tbi | 44.14 KB | a848f68e471f60d6d9834d3891267d33 |
| genomic_resource.yaml | 1.47 KB | eb7e87cbe2890461a93715ca187d2a59 |
| statistics/ |
