Resource

Id TF_ChIP-seq/ENCSR000BICcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BIC [biosample_summary="Homo sapiens H1" and target="POLR2AphosphoS5"]
Description
Labels
  • accession: ENCSR000BIC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-12-12T06:28:23.114272+00:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BIC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: POLR2AphosphoS5

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BIC float

TF_ChIP-seq_ENCSR000BIC
TF_ChIP-seq ENCSR000BIC [biosample_summary="Homo sapiens H1" and target="POLR2AphosphoS5"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BIC [7.78, 390]
n
10,906,442
mean
58.2
sd
42.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 109064420.34% 37409
chr1 1103214 0.44% 3786
chr1_KI270713v1_random 532 1.31% 2
chr2 698339 0.29% 2359
chr3 604140 0.30% 2104
chr4 409925 0.22% 1400
chr5 585047 0.32% 2026
chr6 666205 0.39% 2180
chr7 556188 0.35% 1845
chr8 381596 0.26% 1327
chr9 409312 0.30% 1451
chr10 399828 0.30% 1393
chr11 608680 0.45% 2081
chr12 563479 0.42% 1942
chr13 213564 0.19% 734
chr14 349597 0.33% 1215
chr15 312681 0.31% 1092
chr16 437905 0.48% 1523
chr17 630429 0.76% 2143
chr18 132245 0.16% 466
chr19 868285 1.48% 2955
chr20 321078 0.50% 1130
chr21 101125 0.22% 343
chr22 294225 0.58% 1009
chrX 251955 0.16% 877
chrY 6868 0.01% 26
3341 contigs with no values (129036340 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37409 1 3383 291.55 282
global segment-length histogram

Files

Filename Size md5
ENCFF418QVJ.bed.gz 570.8 KB e02c29a59b2bea50cecbdaf1d09060a2
ENCFF418QVJ.tabix.bed.gz 427.12 KB 30a363b5b2928020f0dd6d83069ebcbe
ENCFF418QVJ.tabix.bed.gz.tbi 141.88 KB 68a30e9c2d8e614d926c43c21a21d450
genomic_resource.yaml 2.06 KB 1b7d6c81ae821692c3b155d70a42c385
statistics/