Resource

Id TF_ChIP-seq/ENCSR000BHZcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000BHZ [biosample_summary="Homo sapiens GM12892" and target="POLR2A"]
Description
Labels
  • accession: ENCSR000BHZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002786/
  • biosample_summary: Homo sapiens GM12892
  • date_created: 2013-09-13T16:01:07.885608-08:00
  • date_released: 2011-07-18
  • doi: 10.17989/ENCSR000BHZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: POLR2A

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000BHZ float

TF_ChIP-seq_ENCSR000BHZ
TF_ChIP-seq ENCSR000BHZ [biosample_summary="Homo sapiens GM12892" and target="POLR2A"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000BHZ [8.26, 564]
n
12,725,901
mean
71.7
sd
62.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 127259010.40% 35851
chr1 1272430 0.51% 3618
chr2 887270 0.37% 2471
chr3 684633 0.35% 1902
chr4 391748 0.21% 1150
chr5 596909 0.33% 1666
chr6 762344 0.45% 2140
chr7 594380 0.37% 1641
chr8 425807 0.29% 1200
chr9 538067 0.39% 1510
chr10 482829 0.36% 1356
chr11 738177 0.55% 2097
chr12 667665 0.50% 1885
chr13 223903 0.20% 628
chr14 466198 0.44% 1334
chr15 400532 0.39% 1120
chr16 545235 0.60% 1535
chr17 814768 0.98% 2286
chr18 186188 0.23% 529
chr19 887313 1.51% 2531
chr20 356037 0.55% 1036
chr21 145466 0.31% 401
chr22 354762 0.70% 971
chrX 303240 0.19% 844
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35851 1 5356 354.97 331
global segment-length histogram

Files

Filename Size md5
ENCFF680DFX.bed.gz 557.41 KB 848570583538452607e398b7f3638612
ENCFF680DFX.tabix.bed.gz 411.4 KB 9b7dcadf7f26a7e7c44036367ea725d4
ENCFF680DFX.tabix.bed.gz.tbi 125.87 KB d237a2a243041fb0eacd9900ed2cd8f0
genomic_resource.yaml 2.07 KB 9081637e9fce9dad99665306f6e83a13
statistics/