Resource

Id TF_ChIP-seq/ENCSR000AUTcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000AUT [biosample_summary="Homo sapiens K562" and target="SETDB1"]
Description
Labels
  • accession: ENCSR000AUT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-11-07T22:16:14.933789+00:00
  • date_released: 2012-08-06
  • doi: 10.17989/ENCSR000AUT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: SETDB1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000AUT float

TF_ChIP-seq_ENCSR000AUT
TF_ChIP-seq ENCSR000AUT [biosample_summary="Homo sapiens K562" and target="SETDB1"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000AUT [5.12, 85.5]
n
531,063
mean
20.5
sd
7.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 5310630.02% 1916
chr1 66082 0.03% 232
chr2 11283 <0.01% 38
chr3 17803 0.01% 65
chr4 5842 <0.01% 21
chr5 16309 0.01% 60
chr6 31387 0.02% 113
chr7 40194 0.03% 148
chr8 6400 <0.01% 20
chr9 8960 0.01% 28
chr10 10320 0.01% 35
chr11 14304 0.01% 50
chr12 12496 0.01% 47
chr13 32410 0.03% 117
chr14 1920 <0.01% 6
chr15 6400 0.01% 20
chr16 15752 0.02% 56
chr17 10763 0.01% 39
chr18 4054 0.01% 14
chr19 16928 0.03% 57
chr20 8594 0.01% 32
chr21 8819 0.02% 30
chr22 183083 0.36% 685
chrX 960 <0.01% 3
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1916 2 320 277.17 320
global segment-length histogram

Files

Filename Size md5
ENCFF095WDB.bed.gz 32.53 KB d915e632e6f6ce92b786fe167b7ed538
ENCFF095WDB.tabix.bed.gz 22.21 KB d56a77e0990be4c671ed3b0f423e32ba
ENCFF095WDB.tabix.bed.gz.tbi 16.12 KB 259366421d9df93b7644225f878e793a
genomic_resource.yaml 1.35 KB c30bf3d2d72d877c8a8b743fcbf81f32
statistics/