Resource

Id TF_ChIP-seq/ENCSR000AUScontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000AUS [biosample_summary="Homo sapiens H1" and target="SIRT6"]
Description
Labels
  • accession: ENCSR000AUS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2013-11-07T22:16:14.276802+00:00
  • date_released: 2012-08-06
  • doi: 10.17989/ENCSR000AUS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: SIRT6

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000AUS float

TF_ChIP-seq_ENCSR000AUS
TF_ChIP-seq ENCSR000AUS [biosample_summary="Homo sapiens H1" and target="SIRT6"]
 HISTOGRAM FOR TF_ChIP-seq_ENCSR000AUS [3.96, 71.2]
n
107,207
mean
15.8
sd
6.99

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 107207<0.01% 451
chr1 7003 <0.01% 29
chr2 6751 <0.01% 28
chr3 4006 <0.01% 20
chr4 5016 <0.01% 19
chr5 8331 <0.01% 34
chr6 15741 0.01% 67
chr7 5113 <0.01% 23
chr8 1584 <0.01% 6
chr9 1056 <0.01% 4
chr10 2516 <0.01% 12
chr11 7158 0.01% 32
chr12 6289 <0.01% 25
chr13 1848 <0.01% 7
chr14 2640 <0.01% 10
chr15 3168 <0.01% 12
chr16 2904 <0.01% 11
chr17 7064 0.01% 28
chr18 731 <0.01% 4
chr19 6940 0.01% 30
chr20 4081 0.01% 19
chr21 528 <0.01% 2
chr22 792 <0.01% 3
chrM 4947 29.86% 21
chrX 1000 <0.01% 5
3342 contigs with no values (186287931 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 451 19 264 237.71 264
global segment-length histogram

Files

Filename Size md5
ENCFF539KSF.bed.gz 7.83 KB 83ddcd9ae73ee0b8f69a41280f6866df
ENCFF539KSF.tabix.bed.gz 5.23 KB 495ff3cb3ed0c8fda658a1d89fcd75f9
ENCFF539KSF.tabix.bed.gz.tbi 7.29 KB 4bfb455480bdba1807d063850f79e370
genomic_resource.yaml 1.53 KB 496b07dcd451dcbffcdb5bec8e3fa7d5
statistics/