Resource

Id TF_ChIP-seq/ENCSR000ATVcontent_copy
Type position_score
Version 0
Summary TF_ChIP-seq ENCSR000ATV [biosample_summary="Homo sapiens K562" and target="CBX3"]
Description
Labels
  • accession: ENCSR000ATV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002067/
  • biosample_summary: Homo sapiens K562
  • date_created: 2013-11-07T22:16:08.212700+00:00
  • date_released: 2012-08-06
  • doi: 10.17989/ENCSR000ATV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: CBX3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
TF_ChIP-seq_ENCSR000ATV float

TF_ChIP-seq_ENCSR000ATV

TF_ChIP-seq ENCSR000ATV [biosample_summary="Homo sapiens K562" and target="CBX3"]
HISTOGRAM FOR TF_ChIP-seq_ENCSR000ATV [4.92, 113]
n
291,685
mean
20.2
sd
8.24

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2916850.01% 1164
chr1 22204 0.01% 86
chr2 6750 <0.01% 25
chr3 5940 <0.01% 22
chr4 2970 <0.01% 11
chr5 4860 <0.01% 18
chr6 9816 0.01% 40
chr7 33944 0.02% 139
chr8 4860 <0.01% 18
chr9 4050 <0.01% 15
chr10 4790 <0.01% 19
chr11 4590 <0.01% 17
chr12 3780 <0.01% 14
chr13 60059 0.05% 241
chr14 1321 <0.01% 6
chr15 2700 <0.01% 10
chr16 3986 <0.01% 16
chr17 1890 <0.01% 7
chr18 3240 <0.01% 12
chr19 13312 0.02% 53
chr20 1890 <0.01% 7
chr21 5609 0.01% 22
chr22 88854 0.17% 365
chrX 270 <0.01% 1
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1164 24 270 250.59 270
global segment-length histogram

Files

Filename Size md5
ENCFF005BKP.bed.gz 20.62 KB 6a23d25330cdaca62d2a1a30cc22ce97
ENCFF005BKP.tabix.bed.gz 13.43 KB ede75295cb126c16c8ad9a076c1ec8cd
ENCFF005BKP.tabix.bed.gz.tbi 11.74 KB 25e551d4592217e69c930624489b5a78
genomic_resource.yaml 1.34 KB c39713148cceba021be74b67a22601b1
statistics/