Resource
| Id | TF_ChIP-seq/ENCSR000ATV |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | TF_ChIP-seq ENCSR000ATV [biosample_summary="Homo sapiens K562" and target="CBX3"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: pseudoreplicated IDR thresholded peaks audit_internal_action: Archived analysis {ENCAN307EPZ|/analyses/ENCAN307EPZ/} has in progress subobject quality standard {encode3-tf-chip|/quality-standards/encode3-tf-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| TF_ChIP-seq_ENCSR000ATV | float |
TF_ChIP-seq_ENCSR000ATV |
TF_ChIP-seq ENCSR000ATV [biosample_summary="Homo sapiens K562" and target="CBX3"]
|
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[4.92, 113] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 291685 | 0.01% | 1164 |
| chr1 | 22204 | 0.01% | 86 |
| chr2 | 6750 | <0.01% | 25 |
| chr3 | 5940 | <0.01% | 22 |
| chr4 | 2970 | <0.01% | 11 |
| chr5 | 4860 | <0.01% | 18 |
| chr6 | 9816 | 0.01% | 40 |
| chr7 | 33944 | 0.02% | 139 |
| chr8 | 4860 | <0.01% | 18 |
| chr9 | 4050 | <0.01% | 15 |
| chr10 | 4790 | <0.01% | 19 |
| chr11 | 4590 | <0.01% | 17 |
| chr12 | 3780 | <0.01% | 14 |
| chr13 | 60059 | 0.05% | 241 |
| chr14 | 1321 | <0.01% | 6 |
| chr15 | 2700 | <0.01% | 10 |
| chr16 | 3986 | <0.01% | 16 |
| chr17 | 1890 | <0.01% | 7 |
| chr18 | 3240 | <0.01% | 12 |
| chr19 | 13312 | 0.02% | 53 |
| chr20 | 1890 | <0.01% | 7 |
| chr21 | 5609 | 0.01% | 22 |
| chr22 | 88854 | 0.17% | 365 |
| chrX | 270 | <0.01% | 1 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 1164 | 24 | 270 | 250.59 | 270 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF005BKP.bed.gz | 20.62 KB | 6a23d25330cdaca62d2a1a30cc22ce97 |
| ENCFF005BKP.tabix.bed.gz | 13.43 KB | ede75295cb126c16c8ad9a076c1ec8cd |
| ENCFF005BKP.tabix.bed.gz.tbi | 11.74 KB | 25e551d4592217e69c930624489b5a78 |
| genomic_resource.yaml | 1.34 KB | c39713148cceba021be74b67a22601b1 |
| statistics/ |
