Resource

Id Histone_ChIP-seq/ENCSR992WXPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR992WXP [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR992WXP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:05.709792+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR992WXP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR992WXP float

Histone_ChIP-seq_ENCSR992WXP
Histone_ChIP-seq ENCSR992WXP [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR992WXP [1.68, 54.6]
n
104,598,537
mean
10.5
sd
9.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1045985373.25% 46668
chr1 3112433 1.25% 1292
chr2 2238174 0.92% 828
chr3 1406042 0.71% 558
chr4 1012886 0.53% 395
chr5 1493854 0.82% 554
chr6 1708355 1.00% 656
chr7 1485259 0.93% 560
chr8 1519029 1.05% 616
chr9 1266110 0.91% 486
chr10 1651080 1.23% 672
chr11 1813303 1.34% 677
chr12 1712066 1.28% 587
chr13 680188 0.59% 225
chr14 889996 0.83% 335
chr15 1067475 1.05% 417
chr16 1234376 1.37% 484
chr17 2280186 2.74% 901
chr18 411798 0.51% 213
chr19 1533130 2.62% 625
chr20 1070016 1.66% 426
chr21 305455 0.65% 130
chr22 894810 1.76% 369
chrX 73812219 47.30% 34661
chrY 297 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46668 216 142869 2241.33 1195
global segment-length histogram

Files

Filename Size md5
ENCFF671DQZ.bed.gz 1.04 MB eb7810c5856879d9a57d9f7fbf5ba4ac
ENCFF671DQZ.tabix.bed.gz 486.64 KB 716fd849cbd9b1bff272d5ec5685d7e1
ENCFF671DQZ.tabix.bed.gz.tbi 81.11 KB a5f39661c440b52bebb50ab38b096a62
genomic_resource.yaml 2.31 KB b5dcfe6bf29c6c5887dabfc628589c1a
statistics/