Resource

Id Histone_ChIP-seq/ENCSR989AMIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR989AMI [biosample_summary="Homo sapiens aorta tissue female adult (30 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR989AMI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000947/
  • biosample_summary: Homo sapiens aorta tissue female adult (30 years)
  • date_created: 2015-10-01T07:16:01.466843+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR989AMI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR989AMI float

Histone_ChIP-seq_ENCSR989AMI
Histone_ChIP-seq ENCSR989AMI [biosample_summary="Homo sapiens aorta tissue female adult (30 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR989AMI [1.93, 11.7]
n
9,494,663
mean
4.45
sd
1.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 94946630.30% 24358
chr1 922444 0.37% 2411
chr2 769370 0.32% 2039
chr3 655315 0.33% 1722
chr4 413553 0.22% 1107
chr5 490405 0.27% 1307
chr6 441796 0.26% 1185
chr7 376387 0.24% 990
chr8 310739 0.21% 832
chr9 449527 0.32% 1134
chr10 444986 0.33% 1180
chr11 486815 0.36% 1276
chr12 527007 0.40% 1332
chr13 207207 0.18% 577
chr14 311599 0.29% 821
chr15 368879 0.36% 977
chr16 329674 0.36% 840
chr17 402334 0.48% 1070
chr18 151981 0.19% 413
chr19 881843 1.50% 1645
chr20 245932 0.38% 653
chr21 80367 0.17% 219
chr22 148946 0.29% 397
chrX 77557 0.05% 231
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24358 165 3723 389.8 339
global segment-length histogram

Files

Filename Size md5
ENCFF132HMQ.bed.gz 448.04 KB 8e002a45221944ce0e93a693320aefa6
ENCFF132HMQ.tabix.bed.gz 234.3 KB 0bb2d7d1c7ad9f8456fca86ad1cc2b73
ENCFF132HMQ.tabix.bed.gz.tbi 117.74 KB f4a87997b97d6ece7b88e2779b7f9773
genomic_resource.yaml 2.2 KB 8966c60fbed31bc8e16bb63c24ce7d2d
statistics/