Resource

Id Histone_ChIP-seq/ENCSR987FAMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR987FAM [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (82 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR987FAM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (82 years)
  • date_created: 2021-04-30T04:18:15.831398+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR987FAM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (82 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR987FAM float

Histone_ChIP-seq_ENCSR987FAM
Histone_ChIP-seq ENCSR987FAM [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (82 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR987FAM [1.78, 61.9]
n
89,933,359
mean
9.24
sd
6.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 899333592.80% 78670
chr1 9052870 3.64% 7770
chr2 6393146 2.64% 5823
chr3 5505765 2.78% 4892
chr4 3418920 1.80% 3138
chr5 4756758 2.62% 4203
chr6 4689600 2.75% 4023
chr7 3985204 2.50% 3851
chr8 3736013 2.57% 3300
chr9 4243505 3.07% 3693
chr10 4594305 3.43% 3845
chr11 5559773 4.12% 4559
chr12 4686988 3.52% 4078
chr13 2015600 1.76% 1805
chr14 3005625 2.81% 2571
chr15 3006115 2.95% 2688
chr16 3197033 3.54% 2846
chr17 5148202 6.18% 4266
chr18 1792554 2.23% 1605
chr19 4010070 6.84% 3329
chr20 2633524 4.09% 2284
chr21 946090 2.03% 878
chr22 2298726 4.52% 1931
chrX 1256973 0.81% 1292
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 78670 205 37087 1143.17 762
global segment-length histogram

Files

Filename Size md5
ENCFF288NLR.bed.gz 1.61 MB 611a32e8d9c7dece156f61fad9af8125
ENCFF288NLR.tabix.bed.gz 799.91 KB fb5946bd21a1e19162bc2042d6e2b2fa
ENCFF288NLR.tabix.bed.gz.tbi 250.82 KB 14f3cfd3df89409c8bac55f2b361ecc7
genomic_resource.yaml 1.57 KB d09d5e5734bcff9a31f5eb832d56de2f
statistics/