Resource

Id Histone_ChIP-seq/ENCSR981CTVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR981CTV [biosample_summary="Homo sapiens tibial nerve tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR981CTV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue male adult (37 years)
  • date_created: 2019-04-27T22:52:32.708376+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR981CTV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR981CTV float

Histone_ChIP-seq_ENCSR981CTV
Histone_ChIP-seq ENCSR981CTV [biosample_summary="Homo sapiens tibial nerve tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR981CTV [1.6, 15.3]
n
209,005,806
mean
4.77
sd
1.74

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2090058066.50% 165078
chr1 20242578 8.13% 15410
chr2 16921136 6.99% 13481
chr3 14240823 7.18% 11592
chr4 8909678 4.68% 7927
chr5 11213656 6.18% 9362
chr6 11862550 6.95% 9915
chr7 10394938 6.52% 8648
chr8 9046454 6.23% 7565
chr9 9558275 6.91% 7292
chr10 11334166 8.47% 8852
chr11 11557799 8.56% 8561
chr12 10122634 7.60% 8122
chr13 5161034 4.51% 4309
chr14 7092124 6.63% 5511
chr15 7560393 7.41% 5865
chr16 7060324 7.82% 5276
chr17 10427685 12.52% 7031
chr18 4018650 5.00% 3492
chr19 7084189 12.09% 4874
chr20 5810502 9.02% 4432
chr21 2442050 5.23% 2086
chr22 4886053 9.61% 3280
chrX 2029532 1.30% 2158
chrY 28583 0.05% 37
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 165078 200 44424 1266.1 872
global segment-length histogram

Files

Filename Size md5
ENCFF468KJZ.bed.gz 3.59 MB 749f16d3e033090f0d5936b4eb1af9e9
ENCFF468KJZ.tabix.bed.gz 1.68 MB 050b6630133c3746d94b3f40f8957297
ENCFF468KJZ.tabix.bed.gz.tbi 360.92 KB 3ec244553d6dbf7135342ce6fefa8154
genomic_resource.yaml 1.71 KB bfad8ca6d7331bb99d42f04d3ebacb1a
statistics/