Resource

Id Histone_ChIP-seq/ENCSR980XMXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR980XMX [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR980XMX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (32 years)
  • date_created: 2015-09-15T20:26:54.662986+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR980XMX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (32 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR980XMX float

Histone_ChIP-seq_ENCSR980XMX
Histone_ChIP-seq ENCSR980XMX [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR980XMX [1.41, 14.5]
n
10,716,839
mean
4.74
sd
1.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 107168390.33% 18750
chr1 627691 0.25% 1136
chr2 563487 0.23% 1144
chr3 470590 0.24% 978
chr4 581786 0.31% 1104
chr5 607946 0.33% 1166
chr6 408658 0.24% 860
chr7 705155 0.44% 1301
chr8 454311 0.31% 894
chr9 364375 0.26% 679
chr10 364939 0.27% 693
chr11 361647 0.27% 755
chr12 577917 0.43% 945
chr13 264143 0.23% 583
chr14 277557 0.26% 566
chr15 260143 0.26% 455
chr16 333862 0.37% 546
chr17 218275 0.26% 366
chr18 169765 0.21% 353
chr19 2531696 4.32% 3159
chr20 172216 0.27% 323
chr21 203708 0.44% 368
chr22 142892 0.28% 248
chrX 35647 0.02% 86
chrY 18433 0.03% 42
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18750 205 10534 571.56 441
global segment-length histogram

Files

Filename Size md5
ENCFF217BXA.bed.gz 333.49 KB 1ec43f153422628cd807c8e2b455acf4
ENCFF217BXA.tabix.bed.gz 179.68 KB ad91877f8beedefc49a44a93bf1db3c0
ENCFF217BXA.tabix.bed.gz.tbi 108.53 KB 7621ac6f60ad166c72d37ef1167af2bc
genomic_resource.yaml 1.55 KB a62ebef657f0e05397dbafbc928cfac1
statistics/