Resource

Id Histone_ChIP-seq/ENCSR979TICcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR979TIC [biosample_summary="Homo sapiens iPS-18a" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR979TIC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007105/
  • biosample_summary: Homo sapiens iPS-18a
  • date_created: 2015-09-15T19:51:32.939359+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR979TIC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR979TIC float

Histone_ChIP-seq_ENCSR979TIC
Histone_ChIP-seq ENCSR979TIC [biosample_summary="Homo sapiens iPS-18a" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR979TIC [1.87, 21.7]
n
54,802,861
mean
5.24
sd
1.66

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 548028611.70% 82283
chr1 3129900 1.26% 4202
chr2 1688711 0.70% 2786
chr3 1335835 0.67% 2283
chr4 1690187 0.89% 2640
chr5 1521382 0.84% 2470
chr6 1377578 0.81% 2302
chr7 2552480 1.60% 3560
chr8 2562600 1.77% 3099
chr9 1134612 0.82% 1769
chr10 1440337 1.08% 2230
chr11 2604954 1.93% 3371
chr12 2625665 1.97% 3695
chr13 1016641 0.89% 1604
chr14 1487277 1.39% 2121
chr15 898112 0.88% 1452
chr16 1470601 1.63% 1614
chr17 918894 1.10% 1178
chr18 906300 1.13% 1648
chr19 5503929 9.39% 6437
chr20 1060743 1.65% 1421
chr21 1065017 2.28% 1553
chr22 783480 1.54% 1078
chrX 16016450 10.26% 27742
chrY 11176 0.02% 28
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 82283 195 18415 666.03 511
global segment-length histogram

Files

Filename Size md5
ENCFF313AJV.bed.gz 1.4 MB 477c94ab11b9dd526301eedd97cc0a32
ENCFF313AJV.tabix.bed.gz 753.35 KB d407e25ae133feadd85b7bc56175e33f
ENCFF313AJV.tabix.bed.gz.tbi 202.3 KB 3b170b02e0421a8a4a86b2a4ed4c43d0
genomic_resource.yaml 2.1 KB b60e278c19a1e6c982d87a27a5313dba
statistics/