Resource

Id Histone_ChIP-seq/ENCSR977TKRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR977TKR [biosample_summary="Homo sapiens placenta tissue female embryo (113 days)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR977TKR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue female embryo (113 days)
  • date_created: 2015-09-16T21:42:42.370344+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR977TKR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (113 days)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR977TKR float

Histone_ChIP-seq_ENCSR977TKR
Histone_ChIP-seq ENCSR977TKR [biosample_summary="Homo sapiens placenta tissue female embryo (113 days)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR977TKR [1.94, 39.7]
n
87,678,507
mean
7.49
sd
3.75

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 876785072.73% 133749
chr1 9147707 3.67% 13681
chr2 6298157 2.60% 10180
chr3 4670000 2.36% 7554
chr4 2414597 1.27% 4277
chr5 3741191 2.06% 6260
chr6 3905186 2.29% 6921
chr7 3998033 2.51% 6348
chr8 3352045 2.31% 5421
chr9 4314253 3.12% 6315
chr10 4231173 3.16% 6497
chr11 5415905 4.01% 7768
chr12 3832154 2.88% 6058
chr13 1330667 1.16% 2496
chr14 3136001 2.93% 4627
chr15 3080748 3.02% 4707
chr16 4298041 4.76% 5786
chr17 5725334 6.88% 7668
chr18 1364435 1.70% 2531
chr19 5323392 9.08% 6821
chr20 3049910 4.73% 4357
chr21 1061978 2.27% 1676
chr22 2860434 5.63% 3658
chrX 1127166 0.72% 2142
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 133749 180 15325 655.55 476
global segment-length histogram

Files

Filename Size md5
ENCFF867CRG.bed.gz 2.61 MB 56f4d5ba8b4952784967a33113e2e32a
ENCFF867CRG.tabix.bed.gz 1.29 MB 76618a15ba6f69c07f5e5e42e6be2f00
ENCFF867CRG.tabix.bed.gz.tbi 307.61 KB ee3699b919343276a1737537adf8c1a6
genomic_resource.yaml 2.21 KB 1d8cb29fc7e7f1448d63f026d62bd899
statistics/