Resource

Id Histone_ChIP-seq/ENCSR972RKXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR972RKX [biosample_summary="Homo sapiens right cardiac atrium tissue male adult (34 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR972RKX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002078/
  • biosample_summary: Homo sapiens right cardiac atrium tissue male adult (34 years)
  • date_created: 2015-10-01T07:15:59.843002+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR972RKX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR972RKX float

Histone_ChIP-seq_ENCSR972RKX
Histone_ChIP-seq ENCSR972RKX [biosample_summary="Homo sapiens right cardiac atrium tissue male adult (34 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR972RKX [2.02, 7.46]
n
1,180,499
mean
3.96
sd
0.66

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 11804990.04% 4109
chr1 107134 0.04% 375
chr2 103452 0.04% 357
chr3 66229 0.03% 230
chr4 50938 0.03% 174
chr5 63830 0.04% 219
chr6 97709 0.06% 330
chr7 55963 0.04% 185
chr8 52792 0.04% 194
chr9 42393 0.03% 150
chr10 64631 0.05% 228
chr11 54722 0.04% 200
chr12 68177 0.05% 236
chr13 38782 0.03% 130
chr14 49572 0.05% 172
chr15 38589 0.04% 142
chr16 35240 0.04% 126
chr17 55538 0.07% 193
chr18 27107 0.03% 97
chr19 20482 0.03% 74
chr20 50191 0.08% 170
chr21 14357 0.03% 48
chr22 21092 0.04% 73
chrX 1579 <0.01% 6
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 4109 185 1006 287.3 261
global segment-length histogram

Files

Filename Size md5
ENCFF538FAA.bed.gz 73.39 KB fa44182525db802fc06ac9e79131808e
ENCFF538FAA.tabix.bed.gz 40.8 KB affdde2d6bdce377c0721b2551e50624
ENCFF538FAA.tabix.bed.gz.tbi 37.5 KB b4fb5de709c0c17f85e9b99f19c376a3
genomic_resource.yaml 2.23 KB 04bfc9f75b5a6bdcc1e5f134ff937bb6
statistics/