Resource

Id Histone_ChIP-seq/ENCSR965BLUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR965BLU [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (37 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR965BLU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue male adult (37 years)
  • date_created: 2018-05-03T16:41:25.900734+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR965BLU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR965BLU float

Histone_ChIP-seq_ENCSR965BLU
Histone_ChIP-seq ENCSR965BLU [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (37 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR965BLU [1.46, 22.7]
n
117,619,101
mean
5.64
sd
3.37

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1176191013.66% 73774
chr1 13103827 5.26% 7648
chr1_KI270709v1_random 2934 4.39% 1
chr1_KI270712v1_random 10796 6.13% 11
chr1_KI270713v1_random 5925 14.54% 3
chr1_KI270714v1_random 1748 4.19% 4
chr2 7001420 2.89% 4962
chr3 3534925 1.78% 2493
chr4 3116531 1.64% 1879
chr5 5318699 2.93% 3452
chr5_GL000208v1_random 469 0.51% 1
chr6 5432860 3.18% 3446
chr7 5376620 3.37% 3413
chr8 5017161 3.46% 3220
chr9 4440809 3.21% 2497
chr9_KI270717v1_random 448 1.12% 1
chr9_KI270719v1_random 1850 1.05% 3
chr9_KI270720v1_random 449 1.15% 1
chr10 6097715 4.56% 4134
chr11 6342947 4.70% 4257
chr12 6187031 4.64% 3938
chr13 2362309 2.07% 1639
chr14 3766166 3.52% 2534
chr14_GL000009v2_random 397 0.20% 1
chr14_GL000194v1_random 350 0.18% 1
chr14_GL000225v1_random 23357 11.06% 23
chr14_KI270723v1_random 1186 3.11% 2
chr14_KI270725v1_random 2457 1.42% 2
chr15 3472916 3.41% 2440
chr16 5287540 5.85% 3416
chr16_KI270728v1_random 766 0.04% 1
chr17 7670683 9.21% 4278
chr17_GL000205v2_random 75514 40.69% 20
chr17_KI270729v1_random 1835 0.65% 1
chr18 1979470 2.46% 1542
chr19 8423265 14.37% 4355
chr20 5895539 9.15% 3526
chr21 1765375 3.78% 1157
chr22 5027268 9.89% 2871
chr22_KI270732v1_random 3474 8.36% 2
chr22_KI270733v1_random 14649 8.15% 19
chr22_KI270735v1_random 1647 3.85% 1
chr22_KI270738v1_random 1615 1.63% 1
chrUn_GL000195v1 11830 6.47% 15
chrUn_GL000214v1 3160 2.29% 5
chrUn_GL000216v2 590 0.33% 1
chrUn_GL000218v1 1929 1.20% 4
chrUn_GL000219v1 29557 16.49% 23
chrUn_GL000220v1 3692 2.28% 8
chrUn_GL000224v1 16548 9.21% 11
chrUn_KI270442v1 3793 0.97% 4
chrUn_KI270744v1 14750 8.76% 13
chrUn_KI270749v1 4047 2.55% 2
chrX 740146 0.47% 475
chrY 16117 0.03% 17
3312 contigs with no values (122986754 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73774 245 98721 1594.32 976
global segment-length histogram

Files

Filename Size md5
ENCFF920GUX.bed.gz 1.41 MB 7a29170923497a006fe0664491bb383e
ENCFF920GUX.tabix.bed.gz 730.9 KB a7c46c3d205417c859f240389ad14cc7
ENCFF920GUX.tabix.bed.gz.tbi 169.98 KB cc6a851782cc953bfff3cead4fc9d22a
genomic_resource.yaml 1.55 KB 1454071129b09a153c02ed57f869c95e
statistics/