Resource

Id Histone_ChIP-seq/ENCSR960UYNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR960UYN [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR960UYN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (51 years)
  • date_created: 2019-08-14T04:40:12.199029+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR960UYN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR960UYN float

Histone_ChIP-seq_ENCSR960UYN
Histone_ChIP-seq ENCSR960UYN [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR960UYN [1.73, 6.95]
n
19,350,654
mean
3.4
sd
0.647

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 193506540.60% 22456
chr1 1954622 0.79% 2358
chr2 1019981 0.42% 1319
chr3 921418 0.46% 1103
chr4 452688 0.24% 595
chr5 660521 0.36% 840
chr6 660725 0.39% 822
chr7 833525 0.52% 988
chr8 480464 0.33% 615
chr9 928764 0.67% 1040
chr10 704322 0.53% 894
chr11 1110539 0.82% 1210
chr12 1158285 0.87% 1306
chr13 177468 0.16% 268
chr14 589575 0.55% 732
chr15 590623 0.58% 722
chr16 1258417 1.39% 1383
chr17 1511080 1.81% 1704
chr18 182105 0.23% 259
chr19 2229621 3.80% 2150
chr20 708712 1.10% 829
chr21 240073 0.51% 284
chr22 836218 1.65% 875
chrX 140908 0.09% 160
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22456 235 10070 861.71 702
global segment-length histogram

Files

Filename Size md5
ENCFF885BKA.bed.gz 451.16 KB 93164517df6a256301118209df621430
ENCFF885BKA.tabix.bed.gz 232.91 KB e951d8ead64c9d6e78c22f3c3f5b8cc9
ENCFF885BKA.tabix.bed.gz.tbi 88.78 KB b5b6ae4ddd1372c896e3cf105a9c8e0e
genomic_resource.yaml 1.78 KB 70f988d2615d13d8856096bc3b87c606
statistics/