Resource

Id Histone_ChIP-seq/ENCSR957UQScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR957UQS [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (45 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR957UQS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue male adult (45 years)
  • date_created: 2015-09-15T20:27:26.227970+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR957UQS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (45 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR957UQS float

Histone_ChIP-seq_ENCSR957UQS
Histone_ChIP-seq ENCSR957UQS [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (45 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR957UQS [1.98, 98]
n
37,449,507
mean
40.5
sd
22.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 374495071.16% 26051
chr1 3672651 1.48% 2561
chr2 2604361 1.08% 1741
chr3 2150575 1.08% 1464
chr4 1585045 0.83% 1079
chr5 1811002 1.00% 1227
chr6 2142528 1.25% 1459
chr7 1865139 1.17% 1346
chr8 1454263 1.00% 1013
chr9 1532013 1.11% 1069
chr10 1636748 1.22% 1115
chr11 2021775 1.50% 1376
chr12 1938550 1.45% 1294
chr13 828947 0.72% 570
chr14 1230051 1.15% 815
chr15 1213856 1.19% 814
chr16 1449490 1.60% 1041
chr17 2084515 2.50% 1474
chr18 657724 0.82% 440
chr19 2261477 3.86% 1786
chr20 1024348 1.59% 682
chr21 354646 0.76% 260
chr22 816568 1.61% 582
chrX 1067402 0.68% 812
chrY 45833 0.08% 31
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26051 160 23586 1437.55 1229
global segment-length histogram

Files

Filename Size md5
ENCFF974SRU.bed.gz 605.05 KB 941444fa26f69050a621bc8db6ec16eb
ENCFF974SRU.tabix.bed.gz 282.64 KB fae9a0350c4dd8210be574e9ac4ee1f9
ENCFF974SRU.tabix.bed.gz.tbi 163.29 KB b487becf13913771222b6e4d512c5573
genomic_resource.yaml 1.52 KB b3825dff61bb405e0f849db0ace99742
statistics/