Resource

Id Histone_ChIP-seq/ENCSR957TGIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR957TGI [biosample_summary="Homo sapiens chorionic villus tissue male embryo (38 weeks)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR957TGI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007106/
  • biosample_summary: Homo sapiens chorionic villus tissue male embryo (38 weeks)
  • date_created: 2017-03-22T16:16:51.412932+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR957TGI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (38 weeks)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR957TGI float

Histone_ChIP-seq_ENCSR957TGI
Histone_ChIP-seq ENCSR957TGI [biosample_summary="Homo sapiens chorionic villus tissue male embryo (38 weeks)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR957TGI [1.4, 9.17]
n
2,790,957
mean
4
sd
0.869

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 27909570.09% 9991
chr1 83058 0.03% 293
chr2 147463 0.06% 591
chr3 129324 0.07% 486
chr4 207325 0.11% 765
chr5 174917 0.10% 634
chr6 109507 0.06% 414
chr7 223402 0.14% 744
chr8 161906 0.11% 632
chr9 81438 0.06% 316
chr10 134153 0.10% 503
chr11 158053 0.12% 564
chr12 161844 0.12% 565
chr13 138363 0.12% 553
chr14 79104 0.07% 324
chr15 62919 0.06% 200
chr16 133272 0.15% 474
chr17 34656 0.04% 128
chr18 84835 0.11% 321
chr19 261714 0.45% 721
chr20 32485 0.05% 127
chr21 151624 0.32% 483
chr22 17592 0.03% 72
chrX 5240 <0.01% 20
chrY 16763 0.03% 61
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9991 110 2374 279.35 239
global segment-length histogram

Files

Filename Size md5
ENCFF833NOQ.bed.gz 176.72 KB 0df73b01def083e171d6c649ac21b577
ENCFF833NOQ.tabix.bed.gz 94.37 KB cee0a5fbe2c94f6dbdf45d79503dafa9
ENCFF833NOQ.tabix.bed.gz.tbi 70.17 KB a00e343e07e588253be24bc2899bd47f
genomic_resource.yaml 2.01 KB 2f9ffa26672668a0cc578b890fefa22d
statistics/