Resource

Id Histone_ChIP-seq/ENCSR954JMZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR954JMZ [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR954JMZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002170/
  • biosample_summary: Homo sapiens upper lobe of right lung tissue male adult (60 years)
  • date_created: 2022-05-11T01:55:20.828784+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR954JMZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR954JMZ float

Histone_ChIP-seq_ENCSR954JMZ
Histone_ChIP-seq ENCSR954JMZ [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR954JMZ [1.79, 59.8]
n
76,695,705
mean
10.3
sd
8.21

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 766957052.38% 60451
chr1 7799573 3.13% 6028
chr2 5733366 2.37% 4590
chr3 4827654 2.43% 3781
chr4 2659273 1.40% 2196
chr5 3578347 1.97% 2866
chr6 4107901 2.41% 3290
chr7 3313147 2.08% 2760
chr8 2831265 1.95% 2378
chr9 3473062 2.51% 2747
chr10 3782973 2.83% 3019
chr11 4130746 3.06% 3170
chr12 4022814 3.02% 3046
chr13 1535189 1.34% 1306
chr14 2612315 2.44% 1986
chr15 2725720 2.67% 2114
chr16 3094362 3.43% 2459
chr17 4766785 5.73% 3506
chr18 1291878 1.61% 1118
chr19 3862383 6.59% 2879
chr20 2255882 3.50% 1716
chr21 888047 1.90% 761
chr22 2028364 3.99% 1528
chrX 1336991 0.86% 1184
chrY 37668 0.07% 23
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60451 220 24304 1268.73 895
global segment-length histogram

Files

Filename Size md5
ENCFF149QUM.bed.gz 1.35 MB c86e8e0fa36828dde71f8e0fe74f14cf
ENCFF149QUM.tabix.bed.gz 641.5 KB 2a740273e091746455880ca8bc987402
ENCFF149QUM.tabix.bed.gz.tbi 217.05 KB 1d5d36b5c905d5b3dafdf967c0fe342d
genomic_resource.yaml 1.54 KB ab8c099d569df2c13d81c0da5847ba06
statistics/