Resource

Id Histone_ChIP-seq/ENCSR952BJXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR952BJX [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR952BJX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue male adult (37 years)
  • date_created: 2019-04-27T22:57:11.789215+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR952BJX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR952BJX float

Histone_ChIP-seq_ENCSR952BJX
Histone_ChIP-seq ENCSR952BJX [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (37 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR952BJX [1.61, 30.9]
n
144,746,526
mean
6.73
sd
5.35

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1447465264.50% 102451
chr1 16200774 6.51% 11127
chr1_KI270709v1_random 1993 2.98% 2
chr1_KI270712v1_random 9740 5.53% 10
chr1_KI270713v1_random 6978 17.13% 5
chr1_KI270714v1_random 1838 4.41% 5
chr2 9932518 4.10% 7458
chr3 5962171 3.01% 4638
chr4 4543788 2.39% 3171
chr5 6629588 3.65% 4834
chr6 7029696 4.12% 4969
chr7 6523609 4.09% 4692
chr8 5993814 4.13% 4373
chr9 6555778 4.74% 4322
chr9_KI270717v1_random 457 1.14% 1
chr10 7471369 5.58% 5646
chr11 8160043 6.04% 6062
chr12 7302981 5.48% 5085
chr13 3172266 2.77% 2510
chr14 4427122 4.14% 3367
chr14_KI270725v1_random 613 0.35% 1
chr15 5439884 5.33% 4231
chr16 5685317 6.29% 4140
chr16_KI270728v1_random 412 0.02% 1
chr17 9456424 11.36% 5792
chr17_GL000205v2_random 67847 36.56% 26
chr18 2464917 3.07% 1856
chr19 7009453 11.96% 4254
chr20 6802107 10.56% 4530
chr21 1918598 4.11% 1331
chr22 5045223 9.93% 3404
chr22_KI270732v1_random 1513 3.64% 2
chr22_KI270733v1_random 5711 3.18% 9
chr22_KI270735v1_random 892 2.08% 1
chr22_KI270738v1_random 944 0.95% 1
chrUn_GL000195v1 3116 1.70% 4
chrUn_GL000218v1 320 0.20% 1
chrUn_GL000219v1 22041 12.30% 16
chrUn_GL000220v1 2198 1.36% 4
chrUn_GL000224v1 6692 3.72% 8
chrUn_KI270744v1 4616 2.74% 5
chrUn_KI270749v1 1421 0.90% 1
chrX 864310 0.55% 540
chrY 15434 0.03% 16
3323 contigs with no values (124925030 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 102451 215 142951 1412.84 819
global segment-length histogram

Files

Filename Size md5
ENCFF806SYI.bed.gz 1.99 MB 3e64328833f78b03e48ab3d97d0f0f6c
ENCFF806SYI.tabix.bed.gz 1016.74 KB 5e713092d4c38d9361759c1aa4f21fc8
ENCFF806SYI.tabix.bed.gz.tbi 199.61 KB 653944b9ab52a841a57909e27195a793
genomic_resource.yaml 1.56 KB 344531a6644d8247bb321bbd22b19cd7
statistics/