Resource

Id Histone_ChIP-seq/ENCSR944KAZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR944KAZ [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR944KAZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue male adult (37 years)
  • date_created: 2019-04-27T22:59:04.629231+00:00
  • date_released: 2019-09-12
  • doi: 10.17989/ENCSR944KAZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR944KAZ float

Histone_ChIP-seq_ENCSR944KAZ
Histone_ChIP-seq ENCSR944KAZ [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR944KAZ [1.39, 75.6]
n
135,241,103
mean
15.4
sd
13.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1352411034.20% 76717
chr1 13834073 5.56% 7535
chr1_KI270713v1_random 1725 4.23% 2
chr2 10205652 4.21% 6144
chr3 8277878 4.17% 4890
chr4 5095207 2.68% 3254
chr5 6408594 3.53% 3763
chr6 6929429 4.06% 4288
chr7 5925432 3.72% 3573
chr8 5389213 3.71% 3245
chr9 6467805 4.67% 3592
chr10 6809960 5.09% 3883
chr11 7489449 5.54% 3893
chr12 6673097 5.01% 3804
chr13 2701102 2.36% 1692
chr14 4709514 4.40% 2576
chr15 4682292 4.59% 2674
chr16 5421533 6.00% 2969
chr17 7949604 9.55% 3978
chr17_GL000205v2_random 1425 0.77% 2
chr18 2340475 2.91% 1440
chr19 6069951 10.36% 2889
chr20 4018542 6.24% 2222
chr21 1709589 3.66% 1006
chr22 3600975 7.09% 1815
chrM 9311 56.20% 4
chrUn_GL000195v1 3665 2.00% 6
chrUn_GL000219v1 3263 1.82% 3
chrUn_GL000220v1 406 0.25% 1
chrUn_KI270438v1 937 0.83% 2
chrX 2445054 1.57% 1526
chrY 65951 0.12% 46
3335 contigs with no values (128197779 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 76717 235 58391 1762.86 1172
global segment-length histogram

Files

Filename Size md5
ENCFF136IJJ.bed.gz 1.92 MB de26c1117ad6a247b75b91be4b3d350f
ENCFF136IJJ.tabix.bed.gz 855.41 KB 19a93936a27d73b1eb53d76473cb26c4
ENCFF136IJJ.tabix.bed.gz.tbi 241.23 KB 3b26ad9fc2c481dec9464d658f524287
genomic_resource.yaml 1.49 KB 638c42f76ee4f38dc1efcf66a634bc4d
statistics/