Resource

Id Histone_ChIP-seq/ENCSR940RIUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR940RIU [biosample_summary="Homo sapiens neuronal stem cell originated from H1" and target="H2BK12ac"]
Description
Labels
  • accession: ENCSR940RIU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0000047/
  • biosample_summary: Homo sapiens neuronal stem cell originated from H1
  • date_created: 2015-10-01T07:16:28.908515+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR940RIU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H2BK12ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR940RIU float

Histone_ChIP-seq_ENCSR940RIU
Histone_ChIP-seq ENCSR940RIU [biosample_summary="Homo sapiens neuronal stem cell originated from H1" and target="H2BK12ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR940RIU [1.35, 13.1]
n
17,011,296
mean
4.56
sd
1.16

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 170112960.53% 53163
chr1 1704103 0.68% 5143
chr2 1190976 0.49% 3783
chr3 721920 0.36% 2292
chr4 539960 0.28% 1726
chr5 617438 0.34% 2056
chr6 642103 0.38% 2103
chr7 846811 0.53% 2668
chr8 674104 0.46% 2157
chr9 899005 0.65% 2653
chr10 770151 0.58% 2492
chr11 1198828 0.89% 3586
chr12 618347 0.46% 1975
chr13 323619 0.28% 1054
chr14 695874 0.65% 2020
chr15 452736 0.44% 1461
chr16 840773 0.93% 2649
chr17 1225443 1.47% 3706
chr18 258779 0.32% 907
chr19 963670 1.64% 3142
chr20 604368 0.94% 1889
chr21 285431 0.61% 898
chr22 836450 1.65% 2387
chrX 98545 0.06% 407
chrY 1862 <0.01% 9
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 53163 125 3312 319.98 273
global segment-length histogram

Files

Filename Size md5
ENCFF681ODS.bed.gz 1.01 MB 89fc1ac21139269810dd0e197d3e44e9
ENCFF681ODS.tabix.bed.gz 514.97 KB 0a61106bd0eedb2d805767abd23ce019
ENCFF681ODS.tabix.bed.gz.tbi 202.39 KB 031fccea6e76bfd5d7d0973282777220
genomic_resource.yaml 1.49 KB 8bd4d1adbd965e18108318a1abb6b41e
statistics/