Resource

Id Histone_ChIP-seq/ENCSR931QOVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR931QOV [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (85 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR931QOV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (85 years)
  • date_created: 2021-08-25T18:07:42.633658+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR931QOV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (85 years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR931QOV float

Histone_ChIP-seq_ENCSR931QOV
Histone_ChIP-seq ENCSR931QOV [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (85 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR931QOV [1.68, 6.68]
n
6,219,450
mean
3.52
sd
0.741

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 62194500.19% 8956
chr1 245074 0.10% 300
chr2 343560 0.14% 351
chr3 92765 0.05% 111
chr4 217620 0.11% 228
chr5 260361 0.14% 276
chr6 323122 0.19% 369
chr7 329536 0.21% 296
chr8 155201 0.11% 191
chr9 139817 0.10% 157
chr10 245915 0.18% 277
chr11 116212 0.09% 148
chr12 218073 0.16% 255
chr13 96383 0.08% 118
chr14 185158 0.17% 213
chr15 137352 0.13% 174
chr16 103971 0.12% 140
chr17 258627 0.31% 276
chr18 67838 0.08% 86
chr19 78819 0.13% 121
chr20 110916 0.17% 141
chr21 71852 0.15% 99
chr22 32304 0.06% 54
chrX 2388974 1.53% 4575
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 8956 190 7232 694.45 535
global segment-length histogram

Files

Filename Size md5
ENCFF214QIV.bed.gz 160.5 KB f49ba62b2134398bd9dcd5133a84860f
ENCFF214QIV.tabix.bed.gz 86.74 KB b89aaa803554cba920af16dc6a4a0db7
ENCFF214QIV.tabix.bed.gz.tbi 43.75 KB a698be063479984b3ab8a3bfd497eb2a
genomic_resource.yaml 1.71 KB 3990db8f441b309eb826610da59c3baf
statistics/