Resource

Id Histone_ChIP-seq/ENCSR928BGPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR928BGP [biosample_summary="Homo sapiens spleen tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR928BGP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue male adult (37 years)
  • date_created: 2019-04-27T22:55:02.268944+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR928BGP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR928BGP float

Histone_ChIP-seq_ENCSR928BGP
Histone_ChIP-seq ENCSR928BGP [biosample_summary="Homo sapiens spleen tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR928BGP [1.46, 19.6]
n
271,227,055
mean
5.69
sd
2.68

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2712270558.43% 134727
chr1 26679406 10.72% 13245
chr2 21333453 8.81% 10719
chr3 17351315 8.75% 8988
chr4 10100227 5.31% 5608
chr5 13159969 7.25% 6683
chr6 15707898 9.20% 7962
chr7 12956956 8.13% 6827
chr8 11011883 7.59% 5559
chr9 11681375 8.44% 5800
chr10 13285880 9.93% 6538
chr11 14210872 10.52% 6598
chr12 13821014 10.37% 6819
chr13 5788576 5.06% 3097
chr14 9770691 9.13% 4642
chr15 9541064 9.35% 4695
chr16 10596668 11.73% 4905
chr17 15301102 18.38% 6886
chr18 4795475 5.97% 2681
chr19 11804330 20.14% 5322
chr20 8200986 12.73% 3885
chr21 3138369 6.72% 1582
chr22 7020544 13.81% 3165
chrX 3803789 2.44% 2404
chrY 165213 0.29% 117
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 134727 200 81121 2013.16 1217
global segment-length histogram

Files

Filename Size md5
ENCFF652QYY.bed.gz 3.17 MB eebb993cdfae474365c30cfcc47e5632
ENCFF652QYY.tabix.bed.gz 1.41 MB 089a7796366b5bdc7d78a18974e21875
ENCFF652QYY.tabix.bed.gz.tbi 270.53 KB f826429f1965a594f09391cf96ea7299
genomic_resource.yaml 1.7 KB 20b8d15345b4fedb307a4739ffc614c6
statistics/