Resource

Id Histone_ChIP-seq/ENCSR927CRVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR927CRV [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR927CRV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (41 years)
  • date_created: 2022-05-11T01:53:55.128977+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR927CRV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR927CRV float

Histone_ChIP-seq_ENCSR927CRV
Histone_ChIP-seq ENCSR927CRV [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR927CRV [1.74, 5.82]
n
3,028,634
mean
3.26
sd
0.588

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 30286340.09% 6576
chr1 304112 0.12% 672
chr2 232708 0.10% 494
chr3 181101 0.09% 404
chr4 96583 0.05% 223
chr5 156736 0.09% 335
chr6 140197 0.08% 325
chr7 119431 0.07% 285
chr8 112495 0.08% 271
chr9 182660 0.13% 386
chr10 153662 0.11% 327
chr11 162965 0.12% 362
chr12 153028 0.11% 333
chr13 51264 0.04% 121
chr14 109020 0.10% 229
chr15 110813 0.11% 238
chr16 145432 0.16% 299
chr17 203913 0.24% 412
chr18 53073 0.07% 119
chr19 122092 0.21% 246
chr20 101151 0.16% 213
chr21 24377 0.05% 51
chr22 98764 0.19% 194
chrX 13057 0.01% 37
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 6576 175 2208 460.56 410
global segment-length histogram

Files

Filename Size md5
ENCFF608RNK.bed.gz 127.89 KB 4c9695782ed2aa83a8ee3a3a8f7db72a
ENCFF608RNK.tabix.bed.gz 68.11 KB ef2375bebecdbce7df68111aada077ba
ENCFF608RNK.tabix.bed.gz.tbi 54.77 KB 29f0570877e3dcbf0b3ec3f768b9a188
genomic_resource.yaml 1.53 KB 9fe43d6dba48c2d9f718be807b372a71
statistics/