Resource

Id Histone_ChIP-seq/ENCSR921OXEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR921OXE [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR921OXE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 18 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:07.965458+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR921OXE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 18 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR921OXE float

Histone_ChIP-seq_ENCSR921OXE
Histone_ChIP-seq ENCSR921OXE [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR921OXE [1.57, 37.6]
n
86,646,965
mean
8.16
sd
7.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 866469652.69% 48620
chr1 2541441 1.02% 1079
chr2 1935482 0.80% 729
chr3 1167574 0.59% 486
chr4 859629 0.45% 358
chr5 1256166 0.69% 478
chr6 1462889 0.86% 573
chr7 1244526 0.78% 446
chr8 1215425 0.84% 497
chr9 1079812 0.78% 426
chr10 1343329 1.00% 549
chr11 1503543 1.11% 594
chr12 1452053 1.09% 493
chr13 589255 0.52% 201
chr14 753838 0.70% 312
chr15 915979 0.90% 355
chr16 1024188 1.13% 434
chr17 1840528 2.21% 740
chr18 352427 0.44% 170
chr19 1257901 2.15% 571
chr20 872167 1.35% 365
chr21 245871 0.53% 103
chr22 722683 1.42% 317
chrX 61010259 39.10% 38344
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 48620 208 133289 1782.13 1012
global segment-length histogram

Files

Filename Size md5
ENCFF122UXJ.bed.gz 1.03 MB 9e56bdb3d7d318015222e93bc7b6580c
ENCFF122UXJ.tabix.bed.gz 496.97 KB ae552e806e96be41806726c7c2cdee9a
ENCFF122UXJ.tabix.bed.gz.tbi 76.6 KB fcba83da733ec9489e31daa701cfde0f
genomic_resource.yaml 2.32 KB 138f1c62100567f5b89207557d204185
statistics/