Resource

Id Histone_ChIP-seq/ENCSR912XALcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR912XAL [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR912XAL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (54 years)
  • date_created: 2017-12-06T21:02:45.480422+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR912XAL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR912XAL float

Histone_ChIP-seq_ENCSR912XAL
Histone_ChIP-seq ENCSR912XAL [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR912XAL [1.58, 7.54]
n
21,640,799
mean
3.09
sd
0.672

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 216407990.67% 28985
chr1 2347664 0.94% 3108
chr2 1507894 0.62% 2085
chr3 1164460 0.59% 1607
chr4 573618 0.30% 845
chr5 922001 0.51% 1279
chr6 1074514 0.63% 1549
chr7 892777 0.56% 1251
chr8 791632 0.55% 1124
chr9 1003852 0.73% 1286
chr10 1058180 0.79% 1370
chr11 1340363 0.99% 1712
chr12 1059355 0.79% 1421
chr13 381586 0.33% 537
chr14 806824 0.75% 1054
chr15 850143 0.83% 1088
chr16 1059433 1.17% 1426
chr17 1527066 1.83% 1970
chr18 313419 0.39% 440
chr19 1325207 2.26% 1674
chr20 712385 1.11% 935
chr21 184040 0.39% 275
chr22 689056 1.36% 858
chrX 55330 0.04% 91
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28985 230 7868 746.62 613
global segment-length histogram

Files

Filename Size md5
ENCFF549HQA.bed.gz 623.93 KB ee385341f175e4ef8befff03c9c1793b
ENCFF549HQA.tabix.bed.gz 307.51 KB 1c58a691219edb121a928539bae03eee
ENCFF549HQA.tabix.bed.gz.tbi 132.07 KB 9be2415621d25dea75845dc25113bc19
genomic_resource.yaml 1.72 KB 7519fb8bf27cfe4f02ee9334fe4378de
statistics/