Resource

Id Histone_ChIP-seq/ENCSR912QMScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR912QMS [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR912QMS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (41 years)
  • date_created: 2020-05-01T02:21:25.158568+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR912QMS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR912QMS float

Histone_ChIP-seq_ENCSR912QMS
Histone_ChIP-seq ENCSR912QMS [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR912QMS [1.81, 67]
n
47,900,413
mean
29
sd
14.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 479004131.49% 27248
chr1 4792942 1.93% 2692
chr2 3329607 1.37% 1884
chr3 2704679 1.36% 1466
chr4 1971298 1.04% 1092
chr5 2230116 1.23% 1268
chr6 2703333 1.58% 1491
chr7 2400572 1.51% 1429
chr8 1832591 1.26% 1059
chr9 1997292 1.44% 1144
chr10 2164238 1.62% 1227
chr11 2582534 1.91% 1413
chr12 2478841 1.86% 1329
chr13 1006551 0.88% 595
chr14 1587618 1.48% 873
chr15 1571921 1.54% 887
chr16 1875915 2.08% 1097
chr17 2736071 3.29% 1539
chr18 796610 0.99% 472
chr19 2999354 5.12% 1820
chr20 1243721 1.93% 733
chr21 452242 0.97% 285
chr22 1083701 2.13% 629
chrX 1358666 0.87% 824
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27248 235 19661 1757.94 1482
global segment-length histogram

Files

Filename Size md5
ENCFF233ABI.bed.gz 705.06 KB b0326bd9bfb241838a69b96a3b77eb13
ENCFF233ABI.tabix.bed.gz 311.42 KB 51ee88e7818057a05e75bf26ec2fd14b
ENCFF233ABI.tabix.bed.gz.tbi 169.17 KB 9393679a8d84689d42b67270895ea779
genomic_resource.yaml 1.71 KB 6d576bc3b5a969df4f8ba90696f154de
statistics/