Resource

Id Histone_ChIP-seq/ENCSR909ZLEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR909ZLE [biosample_summary="Homo sapiens chorion tissue male embryo (16 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR909ZLE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003124/
  • biosample_summary: Homo sapiens chorion tissue male embryo (16 weeks)
  • date_created: 2015-09-15T20:27:43.471737+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR909ZLE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR909ZLE float

Histone_ChIP-seq_ENCSR909ZLE
Histone_ChIP-seq ENCSR909ZLE [biosample_summary="Homo sapiens chorion tissue male embryo (16 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR909ZLE [1.8, 26.7]
n
68,559,663
mean
6.98
sd
3.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 685596632.13% 62929
chr1 7585390 3.05% 6764
chr2 5398663 2.23% 4931
chr3 4770603 2.41% 4264
chr4 2888900 1.52% 2738
chr5 3519764 1.94% 3290
chr6 4038231 2.36% 3656
chr7 3311999 2.08% 3092
chr8 2873240 1.98% 2702
chr9 3141323 2.27% 2861
chr10 3340504 2.50% 2967
chr11 3788143 2.80% 3392
chr12 3415426 2.56% 3095
chr13 1577063 1.38% 1469
chr14 2530210 2.36% 2227
chr15 2188088 2.15% 2038
chr16 1979233 2.19% 1905
chr17 3075021 3.69% 2825
chr18 1280172 1.59% 1221
chr19 2826687 4.82% 2621
chr20 1785184 2.77% 1618
chr21 958872 2.05% 869
chr22 1358391 2.67% 1246
chrX 877125 0.56% 1065
chrY 51431 0.09% 73
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62929 220 15852 1089.48 799
global segment-length histogram

Files

Filename Size md5
ENCFF612JTV.bed.gz 1.24 MB de5706e9d697f2144e4a9283a0177e03
ENCFF612JTV.tabix.bed.gz 633.89 KB cb4abb86e117b3dd539d486a978e69d7
ENCFF612JTV.tabix.bed.gz.tbi 204.21 KB 53f9ba22a8b8c6e7a3c1cf970d91bfb2
genomic_resource.yaml 1.49 KB 16b9a7c562e31428f38fe1a9d48ace9e
statistics/