Resource

Id Histone_ChIP-seq/ENCSR909VUBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR909VUB [biosample_summary="Homo sapiens thoracic aorta tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR909VUB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001515/
  • biosample_summary: Homo sapiens thoracic aorta tissue male adult (54 years)
  • date_created: 2016-03-19T00:37:18.251253+00:00
  • date_released: 2016-10-27
  • doi: 10.17989/ENCSR909VUB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR909VUB float

Histone_ChIP-seq_ENCSR909VUB
Histone_ChIP-seq ENCSR909VUB [biosample_summary="Homo sapiens thoracic aorta tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR909VUB [1.39, 8.11]
n
10,760,557
mean
3.43
sd
0.946

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 107605570.33% 33980
chr1 617967 0.25% 2244
chr2 555680 0.23% 2159
chr3 529729 0.27% 1988
chr4 581822 0.31% 1973
chr5 803673 0.44% 2496
chr6 421980 0.25% 1667
chr7 623567 0.39% 2177
chr8 364098 0.25% 1398
chr9 419431 0.30% 1284
chr10 440304 0.33% 1504
chr11 370288 0.27% 1444
chr12 569164 0.43% 1759
chr13 196053 0.17% 805
chr14 225610 0.21% 862
chr15 270775 0.27% 926
chr16 323142 0.36% 970
chr17 169058 0.20% 561
chr18 163184 0.20% 601
chr19 2660429 4.54% 5418
chr20 117157 0.18% 467
chr21 180566 0.39% 652
chr22 88920 0.17% 318
chrX 44654 0.03% 186
chrY 23306 0.04% 121
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33980 105 14147 316.67 216
global segment-length histogram

Files

Filename Size md5
ENCFF675ZBJ.bed.gz 622.49 KB a04cfa35d35ca6031704cb296a9372ab
ENCFF675ZBJ.tabix.bed.gz 325.84 KB d27cf1278ca060ddef341140e303a668
ENCFF675ZBJ.tabix.bed.gz.tbi 136.84 KB 16d7a768392e57432fca23c9ae620050
genomic_resource.yaml 1.5 KB 31c338e8fb9cfcdb92b057819eb68863
statistics/