Resource

Id Histone_ChIP-seq/ENCSR909UAGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR909UAG [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR909UAG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (53 years)
  • date_created: 2016-10-19T23:03:20.513621+00:00
  • date_released: 2016-11-07
  • doi: 10.17989/ENCSR909UAG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR909UAG float

Histone_ChIP-seq_ENCSR909UAG
Histone_ChIP-seq ENCSR909UAG [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR909UAG [1.36, 86]
n
111,670,629
mean
15.2
sd
13.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1116706293.47% 96263
chr1 11796452 4.74% 9667
chr1_KI270706v1_random 711 0.41% 1
chr1_KI270713v1_random 1104 2.71% 2
chr2 8512314 3.51% 7523
chr3 6861109 3.46% 6147
chr4 3801505 2.00% 3706
chr5 5123332 2.82% 4539
chr6 5709210 3.34% 5273
chr7 4692699 2.94% 4309
chr8 4338893 2.99% 4085
chr9 5361272 3.87% 4520
chr10 5916678 4.42% 5102
chr11 6096763 4.51% 4798
chr12 5481285 4.11% 4692
chr13 2252418 1.97% 2101
chr14 3976160 3.71% 3248
chr15 3938373 3.86% 3496
chr16 4322692 4.79% 3703
chr17 6589969 7.92% 5138
chr17_GL000205v2_random 768 0.41% 1
chr18 1913641 2.38% 1810
chr19 5065070 8.64% 3865
chr20 3431267 5.32% 2925
chr21 1469055 3.15% 1360
chr22 3025355 5.95% 2366
chr22_KI270733v1_random 236 0.13% 1
chrM 7141 43.10% 8
chrUn_GL000195v1 3353 1.83% 6
chrUn_GL000219v1 2220 1.24% 2
chrUn_GL000220v1 228 0.14% 1
chrUn_KI270438v1 494 0.44% 1
chrX 1978862 1.27% 1867
3334 contigs with no values (185070367 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 96263 200 50216 1160.06 761
global segment-length histogram

Files

Filename Size md5
ENCFF696QZI.bed.gz 2.2 MB df86d4c5ae23136b1be1a7b4de212877
ENCFF696QZI.tabix.bed.gz 1021.52 KB e70be367e59b375c8ee36c06dad4ef15
ENCFF696QZI.tabix.bed.gz.tbi 265.53 KB 7378ccc4a8df974d83975f6458b885e5
genomic_resource.yaml 1.57 KB 6cad2c992241834b1c48c428f7827338
statistics/