Resource

Id Histone_ChIP-seq/ENCSR903QBXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR903QBX [biosample_summary="Homo sapiens stomach tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR903QBX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue female adult (53 years)
  • date_created: 2016-10-19T23:12:06.653138+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR903QBX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR903QBX float

Histone_ChIP-seq_ENCSR903QBX
Histone_ChIP-seq ENCSR903QBX [biosample_summary="Homo sapiens stomach tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR903QBX [1.23, 15.9]
n
97,357,540
mean
4.82
sd
1.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 973575403.03% 89943
chr1 10321628 4.15% 9304
chr2 6901333 2.85% 6709
chr3 5488649 2.77% 5452
chr4 3197552 1.68% 3350
chr5 4460352 2.46% 4429
chr6 4890540 2.86% 5002
chr7 4304476 2.70% 4191
chr8 3671401 2.53% 3702
chr9 4583886 3.31% 4059
chr10 4625228 3.46% 4363
chr11 5753640 4.26% 4933
chr12 4452375 3.34% 4264
chr13 1747523 1.53% 1853
chr14 3437341 3.21% 3063
chr15 3488548 3.42% 3260
chr16 4427664 4.90% 3693
chr17 6388458 7.67% 5078
chr18 1530175 1.90% 1634
chr19 5422635 9.25% 4107
chr20 3121377 4.84% 2796
chr21 1182323 2.53% 1160
chr22 3020424 5.94% 2405
chrM 6693 40.39% 6
chrX 933319 0.60% 1130
3342 contigs with no values (186287931 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89943 225 18762 1082.44 825
global segment-length histogram

Files

Filename Size md5
ENCFF259QHQ.bed.gz 1.88 MB faed847af062f7ba85ea573179dc4a7b
ENCFF259QHQ.tabix.bed.gz 929.66 KB ffdf5264f22ee0c3adc4d7121868b273
ENCFF259QHQ.tabix.bed.gz.tbi 257.74 KB 9d7eec2eaf381493fb3047201d69079d
genomic_resource.yaml 1.5 KB 316cc4e18f7de57f245990134f539a33
statistics/