Resource

Id Histone_ChIP-seq/ENCSR899TDFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR899TDF [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR899TDF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0011907/
  • biosample_summary: Homo sapiens gastrocnemius medialis tissue female adult (53 years)
  • date_created: 2017-01-24T04:32:09.918426+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR899TDF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR899TDF float

Histone_ChIP-seq_ENCSR899TDF
Histone_ChIP-seq ENCSR899TDF [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR899TDF [1.33, 6.35]
n
1,542,955
mean
3.32
sd
0.651

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 15429550.05% 3339
chr1 77463 0.03% 186
chr2 71985 0.03% 184
chr3 66750 0.03% 164
chr4 98062 0.05% 228
chr5 89662 0.05% 209
chr6 59065 0.03% 143
chr7 77584 0.05% 186
chr8 62387 0.04% 151
chr9 57495 0.04% 116
chr10 56483 0.04% 133
chr11 40360 0.03% 98
chr12 89566 0.07% 160
chr13 25661 0.02% 69
chr14 34454 0.03% 90
chr15 31650 0.03% 73
chr16 59983 0.07% 114
chr17 24039 0.03% 52
chr18 24652 0.03% 63
chr19 367476 0.63% 591
chr20 13882 0.02% 38
chr21 29443 0.06% 66
chr22 6189 0.01% 13
chrX 77119 0.05% 208
chrY 1545 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3339 195 4193 462.1 387
global segment-length histogram

Files

Filename Size md5
ENCFF750PNJ.bed.gz 63.28 KB 24cf90e72674b0f71e8bf4c84919731b
ENCFF750PNJ.tabix.bed.gz 33.96 KB 434e12e0444a463d17caef99fd8baa0f
ENCFF750PNJ.tabix.bed.gz.tbi 31.78 KB a79ddce6d59aa006e9835b0837b83c4c
genomic_resource.yaml 1.55 KB 13ac988667f2188cc97bfa7217038520
statistics/