Resource

Id Histone_ChIP-seq/ENCSR897TGRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR897TGR [biosample_summary="Homo sapiens sigmoid colon tissue male child (3 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR897TGR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male child (3 years)
  • date_created: 2015-09-16T19:17:15.776201+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR897TGR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR897TGR float

Histone_ChIP-seq_ENCSR897TGR
Histone_ChIP-seq ENCSR897TGR [biosample_summary="Homo sapiens sigmoid colon tissue male child (3 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR897TGR [1.49, 11.3]
n
14,732,112
mean
4.58
sd
1.14

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 147321120.46% 47331
chr1 1461235 0.59% 4727
chr2 1152548 0.48% 3737
chr3 669807 0.34% 2250
chr4 577065 0.30% 1837
chr4_GL000008v2_random 250 0.12% 1
chr5 870835 0.48% 2765
chr6 886565 0.52% 2816
chr7 703381 0.44% 2290
chr8 672755 0.46% 2254
chr9 655246 0.47% 2040
chr9_KI270718v1_random 459 1.21% 1
chr10 885828 0.66% 2812
chr11 776045 0.57% 2476
chr12 753535 0.57% 2350
chr13 406697 0.36% 1303
chr14 452988 0.42% 1492
chr15 512411 0.50% 1651
chr16 461629 0.51% 1581
chr17 716205 0.86% 2142
chr17_GL000205v2_random 6648 3.58% 18
chr17_KI270730v1_random 322 0.29% 1
chr18 337240 0.42% 1177
chr19 552077 0.94% 1677
chr20 643650 1.00% 2074
chr21 172783 0.37% 572
chr22 313328 0.62% 1008
chr22_KI270733v1_random 154 0.09% 1
chr22_KI270736v1_random 364 0.20% 2
chrM 892 5.38% 3
chrUn_GL000216v2 270 0.15% 1
chrUn_GL000219v1 2403 1.34% 6
chrUn_GL000224v1 267 0.15% 1
chrUn_KI270438v1 464 0.41% 1
chrUn_KI270442v1 960 0.24% 2
chrUn_KI270751v1 204 0.14% 1
chrX 83141 0.05% 256
chrY 1461 <0.01% 5
3329 contigs with no values (126962112 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47331 130 3685 311.26 255
global segment-length histogram

Files

Filename Size md5
ENCFF145YBF.bed.gz 949.66 KB fa538fdad40480d2c95019d2eaeceb39
ENCFF145YBF.tabix.bed.gz 468.19 KB 7c053949ec34927f91d3e6a95e2c4c77
ENCFF145YBF.tabix.bed.gz.tbi 210.7 KB ce7ba038dbfb4111fc4b5b400563cddf
genomic_resource.yaml 1.99 KB 5675fb3624dc7c6494bee4634ee80f8d
statistics/