Resource

Id Histone_ChIP-seq/ENCSR890QGKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR890QGK [biosample_summary="Homo sapiens B cell male adult (21 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR890QGK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000236/
  • biosample_summary: Homo sapiens B cell male adult (21 years)
  • date_created: 2015-09-16T21:42:00.917566+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR890QGK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR890QGK float

Histone_ChIP-seq_ENCSR890QGK
Histone_ChIP-seq ENCSR890QGK [biosample_summary="Homo sapiens B cell male adult (21 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR890QGK [1.63, 18.1]
n
27,772,549
mean
5.61
sd
1.99

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 277725490.86% 51723
chr1 2055109 0.83% 3748
chr2 2107776 0.87% 4131
chr3 1633762 0.82% 3197
chr4 1544265 0.81% 3024
chr5 1695658 0.93% 3279
chr6 1565359 0.92% 3090
chr7 1586374 1.00% 3036
chr8 1391575 0.96% 2708
chr9 1055956 0.76% 1942
chr10 1206935 0.90% 2286
chr11 1133954 0.84% 2283
chr12 1601317 1.20% 2908
chr13 721343 0.63% 1520
chr14 888069 0.83% 1790
chr15 709019 0.70% 1322
chr16 832320 0.92% 1543
chr17 624613 0.75% 1175
chr18 571705 0.71% 1095
chr19 3175196 5.42% 4363
chr20 504956 0.78% 964
chr21 424661 0.91% 828
chr22 379178 0.75% 691
chrX 305191 0.20% 671
chrY 58258 0.10% 129
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51723 145 24159 536.95 390
global segment-length histogram

Files

Filename Size md5
ENCFF698KIG.bed.gz 1003.22 KB 42c7fbb3f352d63ca544694ecec5cecc
ENCFF698KIG.tabix.bed.gz 507.03 KB a5a039a03972acc8923def985575620d
ENCFF698KIG.tabix.bed.gz.tbi 222.44 KB 6dbdf834dbe5e39f550de2a4c0f75448
genomic_resource.yaml 1.68 KB 273f2ee18fac1b6d2c91d24aa89af696
statistics/